Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.69■■□□□ 1.06
Thumpd3P97770 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Thumpd3P97770 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.69■■□□□ 1.06
Thumpd3P97770 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Thumpd3P97770 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Thumpd3P97770 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Thumpd3P97770 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Thumpd3P97770 Gm14523-201ENSMUST00000117260 558 ntBASIC21.68■■□□□ 1.06
Thumpd3P97770 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Thumpd3P97770 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Thumpd3P97770 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Thumpd3P97770 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Thumpd3P97770 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Thumpd3P97770 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Thumpd3P97770 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Thumpd3P97770 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Thumpd3P97770 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Thumpd3P97770 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Thumpd3P97770 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Thumpd3P97770 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
Thumpd3P97770 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Thumpd3P97770 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Thumpd3P97770 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.67■■□□□ 1.06
Thumpd3P97770 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.67■■□□□ 1.06
Thumpd3P97770 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Thumpd3P97770 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Thumpd3P97770 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.66■■□□□ 1.06
Thumpd3P97770 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.66■■□□□ 1.06
Thumpd3P97770 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Thumpd3P97770 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Thumpd3P97770 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Thumpd3P97770 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Thumpd3P97770 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Thumpd3P97770 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Thumpd3P97770 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC21.65■■□□□ 1.06
Thumpd3P97770 Terc-201ENSMUST00000082862 423 ntBASIC21.65■■□□□ 1.06
Thumpd3P97770 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Thumpd3P97770 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Thumpd3P97770 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
Thumpd3P97770 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Thumpd3P97770 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Thumpd3P97770 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.64■■□□□ 1.05
Thumpd3P97770 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Thumpd3P97770 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Thumpd3P97770 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Thumpd3P97770 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Thumpd3P97770 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Thumpd3P97770 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Thumpd3P97770 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Thumpd3P97770 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.63■■□□□ 1.05
Thumpd3P97770 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Thumpd3P97770 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Thumpd3P97770 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.63■■□□□ 1.05
Thumpd3P97770 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Thumpd3P97770 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Thumpd3P97770 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Thumpd3P97770 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Thumpd3P97770 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.62■■□□□ 1.05
Thumpd3P97770 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Thumpd3P97770 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Thumpd3P97770 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Thumpd3P97770 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Thumpd3P97770 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.61■■□□□ 1.05
Thumpd3P97770 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Thumpd3P97770 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Thumpd3P97770 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.61■■□□□ 1.05
Thumpd3P97770 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Thumpd3P97770 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Thumpd3P97770 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Thumpd3P97770 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Thumpd3P97770 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Thumpd3P97770 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Thumpd3P97770 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Thumpd3P97770 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Thumpd3P97770 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Thumpd3P97770 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Thumpd3P97770 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Thumpd3P97770 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Thumpd3P97770 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Thumpd3P97770 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Thumpd3P97770 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.58■■□□□ 1.05
Thumpd3P97770 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Thumpd3P97770 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Thumpd3P97770 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Thumpd3P97770 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Thumpd3P97770 Gm22567-201ENSMUST00000175542 342 ntBASIC21.57■■□□□ 1.04
Thumpd3P97770 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.57■■□□□ 1.04
Thumpd3P97770 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.57■■□□□ 1.04
Thumpd3P97770 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Thumpd3P97770 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Thumpd3P97770 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Thumpd3P97770 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Thumpd3P97770 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.56■■□□□ 1.04
Thumpd3P97770 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Thumpd3P97770 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Thumpd3P97770 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.56■■□□□ 1.04
Thumpd3P97770 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Thumpd3P97770 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Thumpd3P97770 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Thumpd3P97770 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 90.5 ms