Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Six5P70178 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Six5P70178 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.04■□□□□ 0.8
Six5P70178 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
Six5P70178 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Six5P70178 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Six5P70178 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Six5P70178 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Six5P70178 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Six5P70178 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Six5P70178 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Six5P70178 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
Six5P70178 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Six5P70178 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Six5P70178 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.03■□□□□ 0.8
Six5P70178 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.03■□□□□ 0.8
Six5P70178 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Six5P70178 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Six5P70178 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Six5P70178 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Six5P70178 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Six5P70178 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.02■□□□□ 0.8
Six5P70178 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Six5P70178 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Six5P70178 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Six5P70178 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Six5P70178 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Six5P70178 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Six5P70178 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Six5P70178 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
Six5P70178 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Six5P70178 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Six5P70178 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20■□□□□ 0.79
Six5P70178 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20■□□□□ 0.79
Six5P70178 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20■□□□□ 0.79
Six5P70178 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20■□□□□ 0.79
Six5P70178 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Six5P70178 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Six5P70178 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Six5P70178 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Six5P70178 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
Six5P70178 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Six5P70178 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Six5P70178 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Six5P70178 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.99■□□□□ 0.79
Six5P70178 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Six5P70178 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Six5P70178 Gm5921-201ENSMUST00000075898 882 ntBASIC19.99■□□□□ 0.79
Six5P70178 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Six5P70178 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Six5P70178 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Six5P70178 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Six5P70178 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.98■□□□□ 0.79
Six5P70178 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.98■□□□□ 0.79
Six5P70178 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Six5P70178 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.98■□□□□ 0.79
Six5P70178 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Six5P70178 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Six5P70178 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Six5P70178 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.97■□□□□ 0.79
Six5P70178 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Six5P70178 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Six5P70178 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Six5P70178 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Six5P70178 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.96■□□□□ 0.79
Six5P70178 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
Six5P70178 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Six5P70178 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Six5P70178 Gm45444-201ENSMUST00000211394 898 ntBASIC19.96■□□□□ 0.79
Six5P70178 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.96■□□□□ 0.79
Six5P70178 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Six5P70178 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Six5P70178 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Six5P70178 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Six5P70178 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.95■□□□□ 0.79
Six5P70178 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
Six5P70178 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Six5P70178 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Six5P70178 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Six5P70178 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.95■□□□□ 0.78
Six5P70178 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Six5P70178 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Six5P70178 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Six5P70178 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Six5P70178 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.95■□□□□ 0.78
Six5P70178 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
Six5P70178 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Six5P70178 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.94■□□□□ 0.78
Six5P70178 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Six5P70178 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Six5P70178 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Six5P70178 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Six5P70178 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.93■□□□□ 0.78
Six5P70178 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Six5P70178 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Six5P70178 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Six5P70178 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Six5P70178 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Six5P70178 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Six5P70178 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms