Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lsm3P62311 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lsm3P62311 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Lsm3P62311 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lsm3P62311 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Lsm3P62311 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Lsm3P62311 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.56■□□□□ 0.72
Lsm3P62311 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lsm3P62311 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Lsm3P62311 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lsm3P62311 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.55■□□□□ 0.72
Lsm3P62311 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lsm3P62311 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Lsm3P62311 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lsm3P62311 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Lsm3P62311 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lsm3P62311 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Lsm3P62311 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lsm3P62311 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lsm3P62311 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.54■□□□□ 0.72
Lsm3P62311 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lsm3P62311 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lsm3P62311 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Lsm3P62311 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Lsm3P62311 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lsm3P62311 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Lsm3P62311 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lsm3P62311 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lsm3P62311 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Lsm3P62311 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lsm3P62311 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Lsm3P62311 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lsm3P62311 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lsm3P62311 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.52■□□□□ 0.72
Lsm3P62311 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lsm3P62311 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lsm3P62311 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
Lsm3P62311 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Lsm3P62311 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Lsm3P62311 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
Lsm3P62311 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Lsm3P62311 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lsm3P62311 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.51■□□□□ 0.71
Lsm3P62311 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lsm3P62311 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Lsm3P62311 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Lsm3P62311 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lsm3P62311 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lsm3P62311 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lsm3P62311 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lsm3P62311 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Lsm3P62311 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.5■□□□□ 0.71
Lsm3P62311 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lsm3P62311 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lsm3P62311 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Lsm3P62311 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Lsm3P62311 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lsm3P62311 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lsm3P62311 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lsm3P62311 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Lsm3P62311 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lsm3P62311 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lsm3P62311 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lsm3P62311 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Lsm3P62311 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.46■□□□□ 0.71
Lsm3P62311 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lsm3P62311 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lsm3P62311 Gm24970-201ENSMUST00000175582 82 ntBASIC19.46■□□□□ 0.71
Lsm3P62311 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
Lsm3P62311 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Lsm3P62311 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Lsm3P62311 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Lsm3P62311 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lsm3P62311 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lsm3P62311 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.45■□□□□ 0.7
Lsm3P62311 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.45■□□□□ 0.7
Lsm3P62311 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lsm3P62311 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lsm3P62311 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Lsm3P62311 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lsm3P62311 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.45■□□□□ 0.7
Lsm3P62311 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lsm3P62311 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Lsm3P62311 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lsm3P62311 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lsm3P62311 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Lsm3P62311 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lsm3P62311 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Lsm3P62311 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lsm3P62311 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Lsm3P62311 Gm37136-201ENSMUST00000194368 194 ntBASIC19.43■□□□□ 0.7
Lsm3P62311 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lsm3P62311 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lsm3P62311 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lsm3P62311 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC19.42■□□□□ 0.7
Lsm3P62311 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Lsm3P62311 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lsm3P62311 Zfp131-205ENSMUST00000223812 663 ntBASIC19.41■□□□□ 0.7
Lsm3P62311 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lsm3P62311 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 230 ms