Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sec61a1P61620 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sec61a1P61620 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sec61a1P61620 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sec61a1P61620 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sec61a1P61620 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Sec61a1P61620 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sec61a1P61620 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
Sec61a1P61620 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sec61a1P61620 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sec61a1P61620 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Sec61a1P61620 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.72■□□□□ 0.59
Sec61a1P61620 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC18.72■□□□□ 0.59
Sec61a1P61620 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC18.72■□□□□ 0.59
Sec61a1P61620 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Sec61a1P61620 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Sec61a1P61620 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sec61a1P61620 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sec61a1P61620 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sec61a1P61620 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sec61a1P61620 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sec61a1P61620 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sec61a1P61620 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC18.71■□□□□ 0.59
Sec61a1P61620 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.71■□□□□ 0.59
Sec61a1P61620 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sec61a1P61620 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sec61a1P61620 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sec61a1P61620 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Sec61a1P61620 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sec61a1P61620 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sec61a1P61620 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sec61a1P61620 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sec61a1P61620 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sec61a1P61620 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Sec61a1P61620 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sec61a1P61620 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sec61a1P61620 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC18.69■□□□□ 0.58
Sec61a1P61620 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sec61a1P61620 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sec61a1P61620 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Sec61a1P61620 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Sec61a1P61620 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Sec61a1P61620 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sec61a1P61620 Gm14523-201ENSMUST00000117260 558 ntBASIC18.68■□□□□ 0.58
Sec61a1P61620 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Sec61a1P61620 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sec61a1P61620 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sec61a1P61620 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sec61a1P61620 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Sec61a1P61620 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sec61a1P61620 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sec61a1P61620 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sec61a1P61620 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sec61a1P61620 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Sec61a1P61620 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Sec61a1P61620 Gm7332-201ENSMUST00000118351 454 ntBASIC18.66■□□□□ 0.58
Sec61a1P61620 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Sec61a1P61620 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Sec61a1P61620 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sec61a1P61620 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Sec61a1P61620 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Sec61a1P61620 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sec61a1P61620 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC18.65■□□□□ 0.58
Sec61a1P61620 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.65■□□□□ 0.58
Sec61a1P61620 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sec61a1P61620 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sec61a1P61620 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Sec61a1P61620 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sec61a1P61620 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sec61a1P61620 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC18.64■□□□□ 0.57
Sec61a1P61620 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Sec61a1P61620 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Sec61a1P61620 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sec61a1P61620 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sec61a1P61620 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.64■□□□□ 0.57
Sec61a1P61620 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sec61a1P61620 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sec61a1P61620 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.63■□□□□ 0.57
Sec61a1P61620 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
Sec61a1P61620 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sec61a1P61620 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sec61a1P61620 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Sec61a1P61620 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sec61a1P61620 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sec61a1P61620 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.63■□□□□ 0.57
Sec61a1P61620 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Sec61a1P61620 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sec61a1P61620 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Sec61a1P61620 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
Sec61a1P61620 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sec61a1P61620 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Sec61a1P61620 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.61■□□□□ 0.57
Sec61a1P61620 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Sec61a1P61620 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sec61a1P61620 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18.6■□□□□ 0.57
Sec61a1P61620 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sec61a1P61620 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sec61a1P61620 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sec61a1P61620 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sec61a1P61620 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms