Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.43■□□□□ 0.7
Cdh11P55288 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cdh11P55288 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cdh11P55288 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cdh11P55288 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cdh11P55288 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cdh11P55288 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cdh11P55288 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cdh11P55288 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cdh11P55288 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cdh11P55288 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cdh11P55288 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cdh11P55288 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cdh11P55288 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cdh11P55288 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cdh11P55288 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cdh11P55288 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cdh11P55288 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Cdh11P55288 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cdh11P55288 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Cdh11P55288 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cdh11P55288 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cdh11P55288 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cdh11P55288 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cdh11P55288 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdh11P55288 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Cdh11P55288 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.4■□□□□ 0.7
Cdh11P55288 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.4■□□□□ 0.7
Cdh11P55288 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdh11P55288 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.4■□□□□ 0.7
Cdh11P55288 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdh11P55288 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cdh11P55288 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cdh11P55288 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
Cdh11P55288 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cdh11P55288 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cdh11P55288 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cdh11P55288 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.39■□□□□ 0.69
Cdh11P55288 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Cdh11P55288 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cdh11P55288 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Cdh11P55288 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cdh11P55288 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cdh11P55288 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cdh11P55288 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cdh11P55288 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Cdh11P55288 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Cdh11P55288 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdh11P55288 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Cdh11P55288 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdh11P55288 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Cdh11P55288 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.38■□□□□ 0.69
Cdh11P55288 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdh11P55288 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cdh11P55288 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdh11P55288 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdh11P55288 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdh11P55288 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdh11P55288 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.37■□□□□ 0.69
Cdh11P55288 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cdh11P55288 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Cdh11P55288 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdh11P55288 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdh11P55288 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.35■□□□□ 0.69
Cdh11P55288 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cdh11P55288 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.35■□□□□ 0.69
Cdh11P55288 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cdh11P55288 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.35■□□□□ 0.69
Cdh11P55288 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cdh11P55288 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cdh11P55288 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Cdh11P55288 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cdh11P55288 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Cdh11P55288 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cdh11P55288 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cdh11P55288 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Cdh11P55288 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cdh11P55288 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cdh11P55288 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.34■□□□□ 0.69
Cdh11P55288 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.34■□□□□ 0.69
Cdh11P55288 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
Cdh11P55288 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cdh11P55288 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cdh11P55288 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cdh11P55288 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Cdh11P55288 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Cdh11P55288 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cdh11P55288 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cdh11P55288 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Cdh11P55288 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cdh11P55288 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Cdh11P55288 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
Cdh11P55288 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdh11P55288 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdh11P55288 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdh11P55288 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdh11P55288 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Cdh11P55288 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cdh11P55288 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdh11P55288 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 96.4 ms