Protein–RNA interactions for Protein: P50446

Krt6a, Keratin, type II cytoskeletal 6A, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt6aP50446 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
Krt6aP50446 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.26■□□□□ 0.99
Krt6aP50446 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Krt6aP50446 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Krt6aP50446 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Krt6aP50446 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Krt6aP50446 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
Krt6aP50446 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.25■□□□□ 0.99
Krt6aP50446 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.25■□□□□ 0.99
Krt6aP50446 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Krt6aP50446 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Krt6aP50446 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Krt6aP50446 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Krt6aP50446 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Krt6aP50446 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Krt6aP50446 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.24■□□□□ 0.99
Krt6aP50446 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Krt6aP50446 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Krt6aP50446 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Krt6aP50446 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Krt6aP50446 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Krt6aP50446 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.23■□□□□ 0.99
Krt6aP50446 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Krt6aP50446 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.23■□□□□ 0.99
Krt6aP50446 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.22■□□□□ 0.99
Krt6aP50446 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Krt6aP50446 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Krt6aP50446 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Krt6aP50446 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Krt6aP50446 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Krt6aP50446 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Krt6aP50446 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Krt6aP50446 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Krt6aP50446 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Krt6aP50446 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.21■□□□□ 0.99
Krt6aP50446 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Krt6aP50446 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Krt6aP50446 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Krt6aP50446 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
Krt6aP50446 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Krt6aP50446 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Krt6aP50446 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Krt6aP50446 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Krt6aP50446 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Krt6aP50446 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Krt6aP50446 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Krt6aP50446 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Krt6aP50446 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Krt6aP50446 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Krt6aP50446 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.19■□□□□ 0.98
Krt6aP50446 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Krt6aP50446 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.19■□□□□ 0.98
Krt6aP50446 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Krt6aP50446 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Krt6aP50446 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Krt6aP50446 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.18■□□□□ 0.98
Krt6aP50446 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.18■□□□□ 0.98
Krt6aP50446 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Krt6aP50446 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Krt6aP50446 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Krt6aP50446 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Krt6aP50446 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.18■□□□□ 0.98
Krt6aP50446 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.18■□□□□ 0.98
Krt6aP50446 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.18■□□□□ 0.98
Krt6aP50446 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Krt6aP50446 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Krt6aP50446 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
Krt6aP50446 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Krt6aP50446 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Krt6aP50446 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Krt6aP50446 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Krt6aP50446 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Krt6aP50446 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Krt6aP50446 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Krt6aP50446 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Krt6aP50446 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Krt6aP50446 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Krt6aP50446 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Krt6aP50446 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Krt6aP50446 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Krt6aP50446 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Krt6aP50446 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Krt6aP50446 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Krt6aP50446 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Krt6aP50446 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Krt6aP50446 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Krt6aP50446 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Krt6aP50446 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
Krt6aP50446 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Krt6aP50446 Scarna2-201ENSMUST00000157560 414 ntBASIC21.13■□□□□ 0.97
Krt6aP50446 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Krt6aP50446 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Krt6aP50446 Gm9806-201ENSMUST00000051080 552 ntBASIC21.13■□□□□ 0.97
Krt6aP50446 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Krt6aP50446 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Krt6aP50446 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Krt6aP50446 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Krt6aP50446 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Krt6aP50446 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Krt6aP50446 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms