Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nkx2-6P43688 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Nkx2-6P43688 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nkx2-6P43688 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nkx2-6P43688 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.32■□□□□ 0.84
Nkx2-6P43688 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Nkx2-6P43688 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nkx2-6P43688 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nkx2-6P43688 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Nkx2-6P43688 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nkx2-6P43688 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nkx2-6P43688 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nkx2-6P43688 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.31■□□□□ 0.84
Nkx2-6P43688 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.31■□□□□ 0.84
Nkx2-6P43688 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nkx2-6P43688 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nkx2-6P43688 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Nkx2-6P43688 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Nkx2-6P43688 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nkx2-6P43688 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Nkx2-6P43688 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
Nkx2-6P43688 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nkx2-6P43688 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nkx2-6P43688 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nkx2-6P43688 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nkx2-6P43688 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nkx2-6P43688 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Nkx2-6P43688 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.29■□□□□ 0.84
Nkx2-6P43688 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nkx2-6P43688 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nkx2-6P43688 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.29■□□□□ 0.84
Nkx2-6P43688 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.29■□□□□ 0.84
Nkx2-6P43688 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Nkx2-6P43688 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nkx2-6P43688 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nkx2-6P43688 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nkx2-6P43688 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nkx2-6P43688 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.28■□□□□ 0.84
Nkx2-6P43688 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nkx2-6P43688 Gm40881-201ENSMUST00000223397 166 ntBASIC20.28■□□□□ 0.84
Nkx2-6P43688 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nkx2-6P43688 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nkx2-6P43688 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nkx2-6P43688 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nkx2-6P43688 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.26■□□□□ 0.83
Nkx2-6P43688 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nkx2-6P43688 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nkx2-6P43688 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.26■□□□□ 0.83
Nkx2-6P43688 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Nkx2-6P43688 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nkx2-6P43688 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nkx2-6P43688 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nkx2-6P43688 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nkx2-6P43688 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.26■□□□□ 0.83
Nkx2-6P43688 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nkx2-6P43688 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nkx2-6P43688 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nkx2-6P43688 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nkx2-6P43688 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.25■□□□□ 0.83
Nkx2-6P43688 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Nkx2-6P43688 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
Nkx2-6P43688 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.25■□□□□ 0.83
Nkx2-6P43688 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nkx2-6P43688 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Nkx2-6P43688 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Nkx2-6P43688 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nkx2-6P43688 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nkx2-6P43688 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nkx2-6P43688 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Nkx2-6P43688 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Nkx2-6P43688 Gm10399-202ENSMUST00000202768 748 ntBASIC20.23■□□□□ 0.83
Nkx2-6P43688 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nkx2-6P43688 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nkx2-6P43688 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Nkx2-6P43688 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nkx2-6P43688 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.22■□□□□ 0.83
Nkx2-6P43688 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.22■□□□□ 0.83
Nkx2-6P43688 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nkx2-6P43688 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.22■□□□□ 0.83
Nkx2-6P43688 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nkx2-6P43688 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Nkx2-6P43688 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Nkx2-6P43688 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.21■□□□□ 0.83
Nkx2-6P43688 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.21■□□□□ 0.83
Nkx2-6P43688 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.21■□□□□ 0.83
Nkx2-6P43688 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.21■□□□□ 0.83
Nkx2-6P43688 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Nkx2-6P43688 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.21■□□□□ 0.83
Nkx2-6P43688 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nkx2-6P43688 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Nkx2-6P43688 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.2■□□□□ 0.82
Nkx2-6P43688 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nkx2-6P43688 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Nkx2-6P43688 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nkx2-6P43688 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nkx2-6P43688 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Nkx2-6P43688 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nkx2-6P43688 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nkx2-6P43688 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nkx2-6P43688 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms