Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Sox6P40645 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sox6P40645 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.99■□□□□ 0.79
Sox6P40645 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sox6P40645 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sox6P40645 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sox6P40645 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sox6P40645 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Sox6P40645 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Sox6P40645 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sox6P40645 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Sox6P40645 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Sox6P40645 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sox6P40645 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sox6P40645 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sox6P40645 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.97■□□□□ 0.79
Sox6P40645 Gm44428-201ENSMUST00000204474 874 ntBASIC19.97■□□□□ 0.79
Sox6P40645 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sox6P40645 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sox6P40645 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
Sox6P40645 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sox6P40645 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.96■□□□□ 0.79
Sox6P40645 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.96■□□□□ 0.79
Sox6P40645 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sox6P40645 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sox6P40645 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sox6P40645 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sox6P40645 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sox6P40645 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Sox6P40645 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Sox6P40645 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sox6P40645 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.95■□□□□ 0.78
Sox6P40645 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sox6P40645 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.95■□□□□ 0.78
Sox6P40645 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Sox6P40645 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sox6P40645 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Sox6P40645 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Sox6P40645 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Sox6P40645 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sox6P40645 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sox6P40645 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sox6P40645 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sox6P40645 Notumos-201ENSMUST00000151998 2659 ntBASIC19.93■□□□□ 0.78
Sox6P40645 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Sox6P40645 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Sox6P40645 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sox6P40645 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sox6P40645 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sox6P40645 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sox6P40645 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.92■□□□□ 0.78
Sox6P40645 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Sox6P40645 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.92■□□□□ 0.78
Sox6P40645 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sox6P40645 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sox6P40645 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sox6P40645 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Sox6P40645 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
Sox6P40645 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.91■□□□□ 0.78
Sox6P40645 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sox6P40645 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sox6P40645 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sox6P40645 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sox6P40645 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sox6P40645 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sox6P40645 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sox6P40645 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sox6P40645 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sox6P40645 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Sox6P40645 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.89■□□□□ 0.77
Sox6P40645 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.89■□□□□ 0.77
Sox6P40645 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.89■□□□□ 0.77
Sox6P40645 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sox6P40645 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sox6P40645 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sox6P40645 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sox6P40645 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sox6P40645 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sox6P40645 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Sox6P40645 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sox6P40645 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sox6P40645 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.87■□□□□ 0.77
Sox6P40645 Gm27502-201ENSMUST00000183495 199 ntBASIC19.87■□□□□ 0.77
Sox6P40645 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.87■□□□□ 0.77
Sox6P40645 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.87■□□□□ 0.77
Sox6P40645 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.86■□□□□ 0.77
Sox6P40645 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.86■□□□□ 0.77
Sox6P40645 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.86■□□□□ 0.77
Sox6P40645 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.86■□□□□ 0.77
Sox6P40645 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sox6P40645 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Sox6P40645 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sox6P40645 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Sox6P40645 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Sox6P40645 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sox6P40645 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Sox6P40645 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sox6P40645 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sox6P40645 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Sox6P40645 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms