Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TfamP40630 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TfamP40630 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
TfamP40630 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TfamP40630 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TfamP40630 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
TfamP40630 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
TfamP40630 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.76■□□□□ 0.91
TfamP40630 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TfamP40630 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
TfamP40630 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
TfamP40630 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TfamP40630 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.75■□□□□ 0.91
TfamP40630 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.75■□□□□ 0.91
TfamP40630 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TfamP40630 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TfamP40630 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TfamP40630 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
TfamP40630 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.73■□□□□ 0.91
TfamP40630 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
TfamP40630 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TfamP40630 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TfamP40630 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TfamP40630 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.73■□□□□ 0.91
TfamP40630 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TfamP40630 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TfamP40630 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TfamP40630 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.72■□□□□ 0.91
TfamP40630 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TfamP40630 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TfamP40630 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.72■□□□□ 0.91
TfamP40630 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TfamP40630 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TfamP40630 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TfamP40630 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.71■□□□□ 0.91
TfamP40630 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TfamP40630 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TfamP40630 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
TfamP40630 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TfamP40630 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TfamP40630 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TfamP40630 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TfamP40630 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TfamP40630 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TfamP40630 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TfamP40630 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.7■□□□□ 0.9
TfamP40630 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TfamP40630 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TfamP40630 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TfamP40630 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TfamP40630 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.69■□□□□ 0.9
TfamP40630 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
TfamP40630 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.69■□□□□ 0.9
TfamP40630 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
TfamP40630 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.69■□□□□ 0.9
TfamP40630 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TfamP40630 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
TfamP40630 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TfamP40630 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TfamP40630 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TfamP40630 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.68■□□□□ 0.9
TfamP40630 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TfamP40630 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
TfamP40630 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TfamP40630 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TfamP40630 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TfamP40630 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.67■□□□□ 0.9
TfamP40630 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TfamP40630 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
TfamP40630 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
TfamP40630 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.67■□□□□ 0.9
TfamP40630 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
TfamP40630 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TfamP40630 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
TfamP40630 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.65■□□□□ 0.9
TfamP40630 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TfamP40630 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TfamP40630 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TfamP40630 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
TfamP40630 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TfamP40630 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TfamP40630 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TfamP40630 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.64■□□□□ 0.89
TfamP40630 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TfamP40630 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.64■□□□□ 0.89
TfamP40630 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TfamP40630 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TfamP40630 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TfamP40630 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TfamP40630 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
TfamP40630 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TfamP40630 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TfamP40630 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TfamP40630 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TfamP40630 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.63■□□□□ 0.89
TfamP40630 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
TfamP40630 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TfamP40630 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TfamP40630 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TfamP40630 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 235.5 ms