Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Gm14523-201ENSMUST00000117260 558 ntBASIC21.3■■□□□ 1
LdlrP35951 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.3■■□□□ 1
LdlrP35951 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LdlrP35951 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.29■■□□□ 1
LdlrP35951 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.29■■□□□ 1
LdlrP35951 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LdlrP35951 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.28■■□□□ 1
LdlrP35951 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.28■■□□□ 1
LdlrP35951 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LdlrP35951 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
LdlrP35951 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.28■■□□□ 1
LdlrP35951 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LdlrP35951 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LdlrP35951 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.27■■□□□ 1
LdlrP35951 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
LdlrP35951 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LdlrP35951 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
LdlrP35951 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LdlrP35951 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
LdlrP35951 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LdlrP35951 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.26■□□□□ 0.99
LdlrP35951 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LdlrP35951 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
LdlrP35951 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LdlrP35951 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
LdlrP35951 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.25■□□□□ 0.99
LdlrP35951 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
LdlrP35951 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.25■□□□□ 0.99
LdlrP35951 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
LdlrP35951 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
LdlrP35951 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LdlrP35951 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LdlrP35951 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LdlrP35951 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.23■□□□□ 0.99
LdlrP35951 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
LdlrP35951 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LdlrP35951 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
LdlrP35951 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
LdlrP35951 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LdlrP35951 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LdlrP35951 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21.22■□□□□ 0.99
LdlrP35951 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LdlrP35951 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
LdlrP35951 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
LdlrP35951 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
LdlrP35951 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.22■□□□□ 0.99
LdlrP35951 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
LdlrP35951 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LdlrP35951 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LdlrP35951 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LdlrP35951 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
LdlrP35951 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
LdlrP35951 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
LdlrP35951 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
LdlrP35951 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LdlrP35951 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LdlrP35951 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
LdlrP35951 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LdlrP35951 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.21■□□□□ 0.99
LdlrP35951 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
LdlrP35951 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
LdlrP35951 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LdlrP35951 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LdlrP35951 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
LdlrP35951 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.2■□□□□ 0.98
LdlrP35951 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LdlrP35951 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
LdlrP35951 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LdlrP35951 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
LdlrP35951 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LdlrP35951 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
LdlrP35951 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
LdlrP35951 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LdlrP35951 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LdlrP35951 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
LdlrP35951 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LdlrP35951 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LdlrP35951 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LdlrP35951 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
LdlrP35951 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.18■□□□□ 0.98
LdlrP35951 Gm15039-201ENSMUST00000118914 875 ntBASIC21.18■□□□□ 0.98
LdlrP35951 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LdlrP35951 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
LdlrP35951 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.18■□□□□ 0.98
LdlrP35951 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
LdlrP35951 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LdlrP35951 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
LdlrP35951 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
LdlrP35951 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LdlrP35951 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.17■□□□□ 0.98
LdlrP35951 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LdlrP35951 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LdlrP35951 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
LdlrP35951 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LdlrP35951 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LdlrP35951 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
LdlrP35951 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.16■□□□□ 0.98
LdlrP35951 Gm5812-201ENSMUST00000061073 957 ntBASIC21.16■□□□□ 0.98
LdlrP35951 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
LdlrP35951 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms