Protein–RNA interactions for Protein: P31649

Slc6a13, Sodium- and chloride-dependent GABA transporter 2, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a13P31649 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Slc6a13P31649 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Slc6a13P31649 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Slc6a13P31649 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Slc6a13P31649 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Slc6a13P31649 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Slc6a13P31649 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Slc6a13P31649 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
Slc6a13P31649 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.89■■□□□ 1.09
Slc6a13P31649 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Slc6a13P31649 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Slc6a13P31649 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Slc6a13P31649 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Slc6a13P31649 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.89■■□□□ 1.09
Slc6a13P31649 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Slc6a13P31649 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.88■■□□□ 1.09
Slc6a13P31649 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.87■■□□□ 1.09
Slc6a13P31649 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Slc6a13P31649 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Slc6a13P31649 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.87■■□□□ 1.09
Slc6a13P31649 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Slc6a13P31649 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Slc6a13P31649 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.86■■□□□ 1.09
Slc6a13P31649 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Slc6a13P31649 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Slc6a13P31649 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
Slc6a13P31649 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Slc6a13P31649 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Slc6a13P31649 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Slc6a13P31649 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Slc6a13P31649 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Slc6a13P31649 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Slc6a13P31649 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Slc6a13P31649 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Slc6a13P31649 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.84■■□□□ 1.09
Slc6a13P31649 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Slc6a13P31649 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Slc6a13P31649 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Slc6a13P31649 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.83■■□□□ 1.09
Slc6a13P31649 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Slc6a13P31649 Gm13238-201ENSMUST00000117655 780 ntBASIC21.83■■□□□ 1.09
Slc6a13P31649 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Slc6a13P31649 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.83■■□□□ 1.09
Slc6a13P31649 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.83■■□□□ 1.09
Slc6a13P31649 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.83■■□□□ 1.09
Slc6a13P31649 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.83■■□□□ 1.08
Slc6a13P31649 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
Slc6a13P31649 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Slc6a13P31649 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.82■■□□□ 1.08
Slc6a13P31649 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.82■■□□□ 1.08
Slc6a13P31649 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.82■■□□□ 1.08
Slc6a13P31649 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Slc6a13P31649 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
Slc6a13P31649 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.81■■□□□ 1.08
Slc6a13P31649 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Slc6a13P31649 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Slc6a13P31649 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Slc6a13P31649 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Slc6a13P31649 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Slc6a13P31649 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Slc6a13P31649 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Slc6a13P31649 Gm5921-201ENSMUST00000075898 882 ntBASIC21.8■■□□□ 1.08
Slc6a13P31649 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Slc6a13P31649 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Slc6a13P31649 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Slc6a13P31649 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Slc6a13P31649 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Slc6a13P31649 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Slc6a13P31649 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Slc6a13P31649 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Slc6a13P31649 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.78■■□□□ 1.08
Slc6a13P31649 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.78■■□□□ 1.08
Slc6a13P31649 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
Slc6a13P31649 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Slc6a13P31649 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Slc6a13P31649 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.78■■□□□ 1.08
Slc6a13P31649 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Slc6a13P31649 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Slc6a13P31649 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Slc6a13P31649 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Slc6a13P31649 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Slc6a13P31649 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Slc6a13P31649 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Slc6a13P31649 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
Slc6a13P31649 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Slc6a13P31649 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.77■■□□□ 1.08
Slc6a13P31649 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Slc6a13P31649 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Slc6a13P31649 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Slc6a13P31649 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Slc6a13P31649 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
Slc6a13P31649 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Slc6a13P31649 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Slc6a13P31649 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Slc6a13P31649 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Slc6a13P31649 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
Slc6a13P31649 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.76■■□□□ 1.07
Slc6a13P31649 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Slc6a13P31649 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.76■■□□□ 1.07
Slc6a13P31649 Gm45444-201ENSMUST00000211394 898 ntBASIC21.75■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms