Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.21■□□□□ 0.67
Ccl3P10855 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccl3P10855 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccl3P10855 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.21■□□□□ 0.67
Ccl3P10855 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ccl3P10855 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccl3P10855 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Ccl3P10855 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Ccl3P10855 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccl3P10855 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccl3P10855 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccl3P10855 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccl3P10855 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.19■□□□□ 0.66
Ccl3P10855 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ccl3P10855 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.19■□□□□ 0.66
Ccl3P10855 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Ccl3P10855 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ccl3P10855 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccl3P10855 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Ccl3P10855 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccl3P10855 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccl3P10855 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Ccl3P10855 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccl3P10855 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.18■□□□□ 0.66
Ccl3P10855 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccl3P10855 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.18■□□□□ 0.66
Ccl3P10855 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccl3P10855 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccl3P10855 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccl3P10855 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccl3P10855 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.17■□□□□ 0.66
Ccl3P10855 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ccl3P10855 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccl3P10855 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.16■□□□□ 0.66
Ccl3P10855 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ccl3P10855 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccl3P10855 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccl3P10855 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Ccl3P10855 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccl3P10855 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccl3P10855 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ccl3P10855 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ccl3P10855 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.15■□□□□ 0.66
Ccl3P10855 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Ccl3P10855 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccl3P10855 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccl3P10855 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.15■□□□□ 0.66
Ccl3P10855 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ccl3P10855 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ccl3P10855 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccl3P10855 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.14■□□□□ 0.66
Ccl3P10855 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ccl3P10855 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ccl3P10855 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Ccl3P10855 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccl3P10855 Gm12821-201ENSMUST00000120022 600 ntBASIC19.14■□□□□ 0.65
Ccl3P10855 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.14■□□□□ 0.65
Ccl3P10855 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.14■□□□□ 0.65
Ccl3P10855 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ccl3P10855 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccl3P10855 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.14■□□□□ 0.65
Ccl3P10855 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccl3P10855 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.13■□□□□ 0.65
Ccl3P10855 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.13■□□□□ 0.65
Ccl3P10855 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ccl3P10855 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccl3P10855 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccl3P10855 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccl3P10855 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Ccl3P10855 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccl3P10855 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.12■□□□□ 0.65
Ccl3P10855 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccl3P10855 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccl3P10855 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ccl3P10855 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccl3P10855 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.12■□□□□ 0.65
Ccl3P10855 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Ccl3P10855 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccl3P10855 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.11■□□□□ 0.65
Ccl3P10855 Gm27454-201ENSMUST00000185090 204 ntBASIC19.11■□□□□ 0.65
Ccl3P10855 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.11■□□□□ 0.65
Ccl3P10855 Golgb1-201ENSMUST00000023534 498 ntBASIC19.11■□□□□ 0.65
Ccl3P10855 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.11■□□□□ 0.65
Ccl3P10855 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccl3P10855 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccl3P10855 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccl3P10855 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ccl3P10855 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.1■□□□□ 0.65
Ccl3P10855 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccl3P10855 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccl3P10855 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccl3P10855 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Ccl3P10855 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
Ccl3P10855 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccl3P10855 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccl3P10855 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.09■□□□□ 0.65
Ccl3P10855 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.09■□□□□ 0.65
Ccl3P10855 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccl3P10855 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccl3P10855 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms