Protein–RNA interactions for Protein: P04944

Ig kappa chain V-VI region NQ5-78.2.6, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04944 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
P04944 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
P04944 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
P04944 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
P04944 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC16.72■□□□□ 0.27
P04944 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
P04944 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC16.71■□□□□ 0.27
P04944 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
P04944 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
P04944 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC16.71■□□□□ 0.27
P04944 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
P04944 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
P04944 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
P04944 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
P04944 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
P04944 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
P04944 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
P04944 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC16.7■□□□□ 0.26
P04944 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
P04944 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
P04944 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
P04944 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
P04944 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
P04944 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
P04944 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
P04944 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
P04944 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
P04944 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
P04944 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
P04944 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
P04944 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
P04944 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
P04944 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC16.68■□□□□ 0.26
P04944 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
P04944 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
P04944 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
P04944 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
P04944 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
P04944 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
P04944 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
P04944 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
P04944 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
P04944 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
P04944 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
P04944 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
P04944 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
P04944 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
P04944 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
P04944 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
P04944 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
P04944 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC16.66■□□□□ 0.26
P04944 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
P04944 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
P04944 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC16.66■□□□□ 0.26
P04944 Nsd1-206ENSMUST00000224918 1001 ntBASIC16.66■□□□□ 0.26
P04944 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
P04944 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
P04944 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
P04944 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
P04944 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
P04944 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC16.65■□□□□ 0.26
P04944 Gm14523-201ENSMUST00000117260 558 ntBASIC16.65■□□□□ 0.26
P04944 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
P04944 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
P04944 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
P04944 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
P04944 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
P04944 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
P04944 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
P04944 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
P04944 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
P04944 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
P04944 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC16.64■□□□□ 0.25
P04944 Gm11175-201ENSMUST00000116172 543 ntBASIC16.63■□□□□ 0.25
P04944 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC16.63■□□□□ 0.25
P04944 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
P04944 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
P04944 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
P04944 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
P04944 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC16.62■□□□□ 0.25
P04944 Gm27502-201ENSMUST00000183495 199 ntBASIC16.62■□□□□ 0.25
P04944 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
P04944 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
P04944 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
P04944 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
P04944 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
P04944 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
P04944 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
P04944 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
P04944 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
P04944 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC16.61■□□□□ 0.25
P04944 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
P04944 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
P04944 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
P04944 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
P04944 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
P04944 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
P04944 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC16.6■□□□□ 0.25
P04944 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
P04944 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms