Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
P04213 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
P04213 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
P04213 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
P04213 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
P04213 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
P04213 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
P04213 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
P04213 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
P04213 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
P04213 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
P04213 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
P04213 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
P04213 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
P04213 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
P04213 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
P04213 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
P04213 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.62■□□□□ 0.89
P04213 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
P04213 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
P04213 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
P04213 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
P04213 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
P04213 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
P04213 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
P04213 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
P04213 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.61■□□□□ 0.89
P04213 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
P04213 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
P04213 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
P04213 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
P04213 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
P04213 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
P04213 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
P04213 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.61■□□□□ 0.89
P04213 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
P04213 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
P04213 Gm7332-201ENSMUST00000118351 454 ntBASIC20.6■□□□□ 0.89
P04213 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
P04213 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.6■□□□□ 0.89
P04213 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
P04213 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
P04213 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.6■□□□□ 0.89
P04213 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
P04213 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
P04213 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
P04213 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
P04213 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
P04213 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
P04213 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
P04213 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
P04213 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
P04213 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
P04213 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.58■□□□□ 0.88
P04213 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
P04213 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.57■□□□□ 0.88
P04213 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.57■□□□□ 0.88
P04213 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
P04213 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
P04213 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
P04213 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
P04213 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
P04213 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
P04213 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
P04213 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
P04213 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
P04213 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
P04213 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
P04213 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.56■□□□□ 0.88
P04213 Gm12366-201ENSMUST00000121722 873 ntBASIC20.56■□□□□ 0.88
P04213 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.56■□□□□ 0.88
P04213 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.56■□□□□ 0.88
P04213 Gm5786-201ENSMUST00000085368 882 ntBASIC20.56■□□□□ 0.88
P04213 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
P04213 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.55■□□□□ 0.88
P04213 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.55■□□□□ 0.88
P04213 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
P04213 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.55■□□□□ 0.88
P04213 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
P04213 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
P04213 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
P04213 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.54■□□□□ 0.88
P04213 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.54■□□□□ 0.88
P04213 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
P04213 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
P04213 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
P04213 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
P04213 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
P04213 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
P04213 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
P04213 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
P04213 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
P04213 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
P04213 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
P04213 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
P04213 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
P04213 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.52■□□□□ 0.88
P04213 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
P04213 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
P04213 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms