Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CcnkO88874 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC18.85■□□□□ 0.61
CcnkO88874 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CcnkO88874 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC18.85■□□□□ 0.61
CcnkO88874 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CcnkO88874 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC18.85■□□□□ 0.61
CcnkO88874 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CcnkO88874 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CcnkO88874 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CcnkO88874 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CcnkO88874 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CcnkO88874 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CcnkO88874 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CcnkO88874 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.84■□□□□ 0.61
CcnkO88874 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
CcnkO88874 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CcnkO88874 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CcnkO88874 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CcnkO88874 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CcnkO88874 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CcnkO88874 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CcnkO88874 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CcnkO88874 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
CcnkO88874 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CcnkO88874 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CcnkO88874 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CcnkO88874 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CcnkO88874 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CcnkO88874 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
CcnkO88874 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CcnkO88874 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18.83■□□□□ 0.6
CcnkO88874 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CcnkO88874 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CcnkO88874 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CcnkO88874 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
CcnkO88874 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CcnkO88874 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CcnkO88874 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CcnkO88874 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CcnkO88874 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CcnkO88874 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC18.82■□□□□ 0.6
CcnkO88874 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CcnkO88874 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC18.81■□□□□ 0.6
CcnkO88874 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CcnkO88874 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CcnkO88874 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CcnkO88874 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CcnkO88874 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CcnkO88874 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.8■□□□□ 0.6
CcnkO88874 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CcnkO88874 Gm9910-201ENSMUST00000195385 1550 ntBASIC18.8■□□□□ 0.6
CcnkO88874 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CcnkO88874 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CcnkO88874 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CcnkO88874 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CcnkO88874 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CcnkO88874 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CcnkO88874 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CcnkO88874 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CcnkO88874 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CcnkO88874 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.79■□□□□ 0.6
CcnkO88874 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CcnkO88874 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.79■□□□□ 0.6
CcnkO88874 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CcnkO88874 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CcnkO88874 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CcnkO88874 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CcnkO88874 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CcnkO88874 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CcnkO88874 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CcnkO88874 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CcnkO88874 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CcnkO88874 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.77■□□□□ 0.6
CcnkO88874 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CcnkO88874 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CcnkO88874 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CcnkO88874 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CcnkO88874 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CcnkO88874 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CcnkO88874 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CcnkO88874 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.76■□□□□ 0.59
CcnkO88874 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CcnkO88874 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CcnkO88874 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CcnkO88874 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CcnkO88874 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CcnkO88874 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CcnkO88874 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CcnkO88874 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CcnkO88874 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CcnkO88874 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.75■□□□□ 0.59
CcnkO88874 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CcnkO88874 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CcnkO88874 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CcnkO88874 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CcnkO88874 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC18.75■□□□□ 0.59
CcnkO88874 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CcnkO88874 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC18.75■□□□□ 0.59
CcnkO88874 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.75■□□□□ 0.59
CcnkO88874 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms