Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.85■□□□□ 0.93
Best1O88870 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Best1O88870 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Best1O88870 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Best1O88870 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Best1O88870 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Best1O88870 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Best1O88870 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.84■□□□□ 0.93
Best1O88870 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Best1O88870 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Best1O88870 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.84■□□□□ 0.93
Best1O88870 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Best1O88870 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.84■□□□□ 0.93
Best1O88870 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Best1O88870 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Best1O88870 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Best1O88870 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Best1O88870 Gm14117-201ENSMUST00000122417 843 ntBASIC20.83■□□□□ 0.93
Best1O88870 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.83■□□□□ 0.93
Best1O88870 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.83■□□□□ 0.93
Best1O88870 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Best1O88870 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Best1O88870 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Best1O88870 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.83■□□□□ 0.92
Best1O88870 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Best1O88870 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Best1O88870 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Best1O88870 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Best1O88870 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.81■□□□□ 0.92
Best1O88870 Gm10399-202ENSMUST00000202768 748 ntBASIC20.81■□□□□ 0.92
Best1O88870 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.81■□□□□ 0.92
Best1O88870 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Best1O88870 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Best1O88870 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.81■□□□□ 0.92
Best1O88870 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Best1O88870 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Best1O88870 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Best1O88870 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Best1O88870 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Best1O88870 Etf1-202ENSMUST00000180351 108 ntBASIC20.8■□□□□ 0.92
Best1O88870 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Best1O88870 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Best1O88870 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Best1O88870 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Best1O88870 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Best1O88870 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Best1O88870 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Best1O88870 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Best1O88870 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Best1O88870 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
Best1O88870 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Best1O88870 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.79■□□□□ 0.92
Best1O88870 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Best1O88870 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.79■□□□□ 0.92
Best1O88870 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Best1O88870 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Best1O88870 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Best1O88870 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Best1O88870 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Best1O88870 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.77■□□□□ 0.92
Best1O88870 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Best1O88870 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Best1O88870 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Best1O88870 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.76■□□□□ 0.91
Best1O88870 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.76■□□□□ 0.91
Best1O88870 Gm40881-201ENSMUST00000223397 166 ntBASIC20.76■□□□□ 0.91
Best1O88870 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Best1O88870 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Best1O88870 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Best1O88870 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Best1O88870 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Best1O88870 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Best1O88870 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Best1O88870 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Best1O88870 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Best1O88870 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.75■□□□□ 0.91
Best1O88870 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.75■□□□□ 0.91
Best1O88870 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.75■□□□□ 0.91
Best1O88870 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Best1O88870 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Best1O88870 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Best1O88870 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Best1O88870 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.74■□□□□ 0.91
Best1O88870 Gm7417-201ENSMUST00000192950 473 ntBASIC20.74■□□□□ 0.91
Best1O88870 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Best1O88870 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Best1O88870 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Best1O88870 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Best1O88870 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Best1O88870 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.73■□□□□ 0.91
Best1O88870 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Best1O88870 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Best1O88870 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Best1O88870 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Best1O88870 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Best1O88870 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Best1O88870 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Best1O88870 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.71■□□□□ 0.91
Best1O88870 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Best1O88870 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms