Protein–RNA interactions for Protein: O88689

Pcdha4, Protocadherin alpha-4, mousemouse

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha4O88689 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Pcdha4O88689 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
Pcdha4O88689 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC24.11■■□□□ 1.45
Pcdha4O88689 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC24.11■■□□□ 1.45
Pcdha4O88689 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Pcdha4O88689 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Pcdha4O88689 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Pcdha4O88689 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
Pcdha4O88689 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC24.1■■□□□ 1.45
Pcdha4O88689 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Pcdha4O88689 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC24.1■■□□□ 1.45
Pcdha4O88689 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
Pcdha4O88689 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Pcdha4O88689 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Pcdha4O88689 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Pcdha4O88689 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
Pcdha4O88689 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Pcdha4O88689 AC115037.1-201ENSMUST00000223391 2173 ntBASIC24.09■■□□□ 1.45
Pcdha4O88689 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC24.08■■□□□ 1.45
Pcdha4O88689 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Pcdha4O88689 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Pcdha4O88689 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Pcdha4O88689 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.44
Pcdha4O88689 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC24.07■■□□□ 1.44
Pcdha4O88689 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC24.07■■□□□ 1.44
Pcdha4O88689 Gm5812-201ENSMUST00000061073 957 ntBASIC24.07■■□□□ 1.44
Pcdha4O88689 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Pcdha4O88689 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Pcdha4O88689 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Pcdha4O88689 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC24.07■■□□□ 1.44
Pcdha4O88689 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Pcdha4O88689 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
Pcdha4O88689 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC24.06■■□□□ 1.44
Pcdha4O88689 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Pcdha4O88689 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Pcdha4O88689 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
Pcdha4O88689 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Pcdha4O88689 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Pcdha4O88689 Gm28536-201ENSMUST00000190971 1317 ntBASIC24.06■■□□□ 1.44
Pcdha4O88689 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Pcdha4O88689 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Pcdha4O88689 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Pcdha4O88689 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Pcdha4O88689 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
Pcdha4O88689 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
Pcdha4O88689 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
Pcdha4O88689 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Pcdha4O88689 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
Pcdha4O88689 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
Pcdha4O88689 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Pcdha4O88689 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Pcdha4O88689 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC24.04■■□□□ 1.44
Pcdha4O88689 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
Pcdha4O88689 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC24.03■■□□□ 1.44
Pcdha4O88689 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Pcdha4O88689 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Pcdha4O88689 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Pcdha4O88689 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Pcdha4O88689 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Pcdha4O88689 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
Pcdha4O88689 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC24.01■■□□□ 1.43
Pcdha4O88689 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Pcdha4O88689 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC24■■□□□ 1.43
Pcdha4O88689 Gm16464-201ENSMUST00000117815 1095 ntBASIC24■■□□□ 1.43
Pcdha4O88689 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC24■■□□□ 1.43
Pcdha4O88689 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
Pcdha4O88689 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
Pcdha4O88689 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Pcdha4O88689 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Pcdha4O88689 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Pcdha4O88689 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
Pcdha4O88689 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Pcdha4O88689 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Pcdha4O88689 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC23.99■■□□□ 1.43
Pcdha4O88689 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Pcdha4O88689 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC23.99■■□□□ 1.43
Pcdha4O88689 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
Pcdha4O88689 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Pcdha4O88689 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
Pcdha4O88689 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC23.98■■□□□ 1.43
Pcdha4O88689 Gm11847-201ENSMUST00000125165 1119 ntBASIC23.98■■□□□ 1.43
Pcdha4O88689 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC23.98■■□□□ 1.43
Pcdha4O88689 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Pcdha4O88689 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
Pcdha4O88689 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
Pcdha4O88689 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
Pcdha4O88689 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC23.97■■□□□ 1.43
Pcdha4O88689 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Pcdha4O88689 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Pcdha4O88689 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Pcdha4O88689 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Pcdha4O88689 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Pcdha4O88689 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
Pcdha4O88689 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Pcdha4O88689 Gm5522-201ENSMUST00000189483 1242 ntBASIC23.96■■□□□ 1.43
Pcdha4O88689 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC23.96■■□□□ 1.43
Pcdha4O88689 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
Pcdha4O88689 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
Pcdha4O88689 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC23.95■■□□□ 1.43
Pcdha4O88689 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC23.95■■□□□ 1.43
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms