Protein–RNA interactions for Protein: O88627

Slc28a2, Sodium/nucleoside cotransporter 2, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a2O88627 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Slc28a2O88627 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Slc28a2O88627 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.95■□□□□ 0.62
Slc28a2O88627 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Slc28a2O88627 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Slc28a2O88627 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Slc28a2O88627 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.94■□□□□ 0.62
Slc28a2O88627 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Slc28a2O88627 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Slc28a2O88627 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Slc28a2O88627 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Slc28a2O88627 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Slc28a2O88627 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Slc28a2O88627 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC18.94■□□□□ 0.62
Slc28a2O88627 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Slc28a2O88627 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slc28a2O88627 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slc28a2O88627 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slc28a2O88627 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slc28a2O88627 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slc28a2O88627 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slc28a2O88627 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
Slc28a2O88627 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Slc28a2O88627 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
Slc28a2O88627 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slc28a2O88627 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slc28a2O88627 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slc28a2O88627 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Slc28a2O88627 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Slc28a2O88627 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.91■□□□□ 0.62
Slc28a2O88627 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC18.91■□□□□ 0.62
Slc28a2O88627 Notumos-201ENSMUST00000151998 2659 ntBASIC18.91■□□□□ 0.62
Slc28a2O88627 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Slc28a2O88627 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
Slc28a2O88627 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Slc28a2O88627 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Slc28a2O88627 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Slc28a2O88627 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Slc28a2O88627 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Slc28a2O88627 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Slc28a2O88627 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Slc28a2O88627 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Slc28a2O88627 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Slc28a2O88627 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.89■□□□□ 0.61
Slc28a2O88627 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Slc28a2O88627 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Slc28a2O88627 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Slc28a2O88627 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Slc28a2O88627 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Slc28a2O88627 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Slc28a2O88627 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Slc28a2O88627 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Slc28a2O88627 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Slc28a2O88627 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Slc28a2O88627 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Slc28a2O88627 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Slc28a2O88627 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Slc28a2O88627 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slc28a2O88627 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slc28a2O88627 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC18.87■□□□□ 0.61
Slc28a2O88627 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slc28a2O88627 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slc28a2O88627 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Slc28a2O88627 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slc28a2O88627 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc28a2O88627 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc28a2O88627 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC18.86■□□□□ 0.61
Slc28a2O88627 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc28a2O88627 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Slc28a2O88627 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc28a2O88627 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc28a2O88627 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc28a2O88627 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Slc28a2O88627 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc28a2O88627 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Slc28a2O88627 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc28a2O88627 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC18.85■□□□□ 0.61
Slc28a2O88627 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc28a2O88627 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.85■□□□□ 0.61
Slc28a2O88627 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Slc28a2O88627 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc28a2O88627 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
Slc28a2O88627 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC18.84■□□□□ 0.61
Slc28a2O88627 AC117769.4-201ENSMUST00000225679 685 ntBASIC18.84■□□□□ 0.61
Slc28a2O88627 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc28a2O88627 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.84■□□□□ 0.61
Slc28a2O88627 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Slc28a2O88627 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc28a2O88627 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Slc28a2O88627 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Slc28a2O88627 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Slc28a2O88627 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Slc28a2O88627 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Slc28a2O88627 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Slc28a2O88627 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.6
Slc28a2O88627 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Slc28a2O88627 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Slc28a2O88627 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Slc28a2O88627 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC18.82■□□□□ 0.6
Slc28a2O88627 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms