Protein–RNA interactions for Protein: O88597

Becn1, Beclin-1, mousemouse

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Becn1O88597 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC24.38■■□□□ 1.49
Becn1O88597 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Becn1O88597 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Becn1O88597 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Becn1O88597 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Becn1O88597 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC24.37■■□□□ 1.49
Becn1O88597 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Becn1O88597 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
Becn1O88597 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
Becn1O88597 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Becn1O88597 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
Becn1O88597 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Becn1O88597 Iqck-206ENSMUST00000208658 2891 ntBASIC24.36■■□□□ 1.49
Becn1O88597 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Becn1O88597 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Becn1O88597 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
Becn1O88597 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC24.36■■□□□ 1.49
Becn1O88597 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Becn1O88597 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Becn1O88597 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
Becn1O88597 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Becn1O88597 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC24.35■■□□□ 1.49
Becn1O88597 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
Becn1O88597 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Becn1O88597 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
Becn1O88597 Gm15043-201ENSMUST00000118843 1543 ntBASIC24.35■■□□□ 1.49
Becn1O88597 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
Becn1O88597 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Becn1O88597 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Becn1O88597 Gm11599-201ENSMUST00000118720 878 ntBASIC24.33■■□□□ 1.49
Becn1O88597 AC131739.1-201ENSMUST00000221692 1245 ntBASIC24.33■■□□□ 1.49
Becn1O88597 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.48
Becn1O88597 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Becn1O88597 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC24.32■■□□□ 1.48
Becn1O88597 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Becn1O88597 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Becn1O88597 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC24.31■■□□□ 1.48
Becn1O88597 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Becn1O88597 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Becn1O88597 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Becn1O88597 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Becn1O88597 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC24.3■■□□□ 1.48
Becn1O88597 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Becn1O88597 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Becn1O88597 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
Becn1O88597 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Becn1O88597 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Becn1O88597 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Becn1O88597 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Becn1O88597 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Becn1O88597 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
Becn1O88597 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Becn1O88597 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Becn1O88597 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
Becn1O88597 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Becn1O88597 Gm4430-201ENSMUST00000192413 1943 ntBASIC24.27■■□□□ 1.48
Becn1O88597 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
Becn1O88597 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Becn1O88597 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Becn1O88597 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Becn1O88597 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Becn1O88597 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Becn1O88597 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Becn1O88597 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Becn1O88597 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
Becn1O88597 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Becn1O88597 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC24.26■■□□□ 1.47
Becn1O88597 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
Becn1O88597 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC24.25■■□□□ 1.47
Becn1O88597 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC24.25■■□□□ 1.47
Becn1O88597 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC24.24■■□□□ 1.47
Becn1O88597 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Becn1O88597 Gm5987-201ENSMUST00000196433 1151 ntBASIC24.24■■□□□ 1.47
Becn1O88597 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Becn1O88597 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Becn1O88597 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
Becn1O88597 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
Becn1O88597 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC24.23■■□□□ 1.47
Becn1O88597 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC24.23■■□□□ 1.47
Becn1O88597 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Becn1O88597 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Becn1O88597 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC24.23■■□□□ 1.47
Becn1O88597 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Becn1O88597 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Becn1O88597 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Becn1O88597 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC24.22■■□□□ 1.47
Becn1O88597 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Becn1O88597 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC24.22■■□□□ 1.47
Becn1O88597 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
Becn1O88597 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
Becn1O88597 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Becn1O88597 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC24.22■■□□□ 1.47
Becn1O88597 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
Becn1O88597 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Becn1O88597 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Becn1O88597 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Becn1O88597 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Becn1O88597 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Becn1O88597 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Becn1O88597 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 166.9 ms