Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Dkk1O54908 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.52■□□□□ 0.56
Dkk1O54908 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Dkk1O54908 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Dkk1O54908 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC18.52■□□□□ 0.56
Dkk1O54908 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.52■□□□□ 0.56
Dkk1O54908 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.52■□□□□ 0.56
Dkk1O54908 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.52■□□□□ 0.56
Dkk1O54908 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.52■□□□□ 0.56
Dkk1O54908 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Dkk1O54908 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Dkk1O54908 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Dkk1O54908 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Dkk1O54908 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Dkk1O54908 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Dkk1O54908 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Dkk1O54908 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Dkk1O54908 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.51■□□□□ 0.55
Dkk1O54908 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Dkk1O54908 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Dkk1O54908 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Dkk1O54908 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Dkk1O54908 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Dkk1O54908 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Dkk1O54908 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Dkk1O54908 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.51■□□□□ 0.55
Dkk1O54908 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Dkk1O54908 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Dkk1O54908 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Dkk1O54908 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.5■□□□□ 0.55
Dkk1O54908 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.5■□□□□ 0.55
Dkk1O54908 Gm45444-201ENSMUST00000211394 898 ntBASIC18.5■□□□□ 0.55
Dkk1O54908 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Dkk1O54908 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Dkk1O54908 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
Dkk1O54908 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Dkk1O54908 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.49■□□□□ 0.55
Dkk1O54908 Gm19087-201ENSMUST00000191430 946 ntBASIC18.49■□□□□ 0.55
Dkk1O54908 Gm43017-201ENSMUST00000198296 752 ntBASIC18.49■□□□□ 0.55
Dkk1O54908 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Dkk1O54908 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Dkk1O54908 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Dkk1O54908 Gm13238-201ENSMUST00000117655 780 ntBASIC18.48■□□□□ 0.55
Dkk1O54908 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.48■□□□□ 0.55
Dkk1O54908 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Dkk1O54908 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Dkk1O54908 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Dkk1O54908 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Dkk1O54908 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Dkk1O54908 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Dkk1O54908 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Dkk1O54908 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Dkk1O54908 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.47■□□□□ 0.55
Dkk1O54908 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Dkk1O54908 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Dkk1O54908 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Dkk1O54908 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Dkk1O54908 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
Dkk1O54908 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Dkk1O54908 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Dkk1O54908 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
Dkk1O54908 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Dkk1O54908 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
Dkk1O54908 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.54
Dkk1O54908 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.46■□□□□ 0.54
Dkk1O54908 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Dkk1O54908 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Dkk1O54908 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Dkk1O54908 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Dkk1O54908 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Dkk1O54908 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.45■□□□□ 0.54
Dkk1O54908 Gm43566-201ENSMUST00000196851 808 ntBASIC18.45■□□□□ 0.54
Dkk1O54908 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Dkk1O54908 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.45■□□□□ 0.54
Dkk1O54908 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Dkk1O54908 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Dkk1O54908 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Dkk1O54908 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.44■□□□□ 0.54
Dkk1O54908 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC18.44■□□□□ 0.54
Dkk1O54908 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Dkk1O54908 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Dkk1O54908 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.43■□□□□ 0.54
Dkk1O54908 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Dkk1O54908 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Dkk1O54908 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Dkk1O54908 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Dkk1O54908 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Dkk1O54908 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Dkk1O54908 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Dkk1O54908 Gm6754-201ENSMUST00000117124 913 ntBASIC18.42■□□□□ 0.54
Dkk1O54908 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Dkk1O54908 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.42■□□□□ 0.54
Dkk1O54908 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
Dkk1O54908 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
Dkk1O54908 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Dkk1O54908 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Dkk1O54908 Gm45251-201ENSMUST00000209486 1465 ntBASIC18.41■□□□□ 0.54
Dkk1O54908 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Dkk1O54908 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.41■□□□□ 0.54
Dkk1O54908 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms