Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Atf6bO35451 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Atf6bO35451 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Atf6bO35451 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Atf6bO35451 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Atf6bO35451 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Atf6bO35451 Gm5921-201ENSMUST00000075898 882 ntBASIC18.48■□□□□ 0.55
Atf6bO35451 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Atf6bO35451 AC117245.4-201ENSMUST00000217388 1646 ntBASIC18.48■□□□□ 0.55
Atf6bO35451 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Atf6bO35451 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Atf6bO35451 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Atf6bO35451 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.47■□□□□ 0.55
Atf6bO35451 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.47■□□□□ 0.55
Atf6bO35451 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC18.47■□□□□ 0.55
Atf6bO35451 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.47■□□□□ 0.55
Atf6bO35451 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Atf6bO35451 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Atf6bO35451 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Atf6bO35451 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC18.46■□□□□ 0.55
Atf6bO35451 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Atf6bO35451 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Atf6bO35451 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Atf6bO35451 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Atf6bO35451 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Atf6bO35451 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Atf6bO35451 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC18.45■□□□□ 0.54
Atf6bO35451 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Atf6bO35451 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Atf6bO35451 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.44■□□□□ 0.54
Atf6bO35451 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Atf6bO35451 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Atf6bO35451 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Atf6bO35451 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Atf6bO35451 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.44■□□□□ 0.54
Atf6bO35451 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Atf6bO35451 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Atf6bO35451 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Atf6bO35451 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Atf6bO35451 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Atf6bO35451 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Atf6bO35451 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Atf6bO35451 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Atf6bO35451 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Atf6bO35451 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Atf6bO35451 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Atf6bO35451 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Atf6bO35451 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Atf6bO35451 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Atf6bO35451 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.42■□□□□ 0.54
Atf6bO35451 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.42■□□□□ 0.54
Atf6bO35451 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.42■□□□□ 0.54
Atf6bO35451 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Atf6bO35451 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Atf6bO35451 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Atf6bO35451 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Atf6bO35451 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Atf6bO35451 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Atf6bO35451 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Atf6bO35451 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Atf6bO35451 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Atf6bO35451 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Atf6bO35451 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Atf6bO35451 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.4■□□□□ 0.54
Atf6bO35451 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Atf6bO35451 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.4■□□□□ 0.54
Atf6bO35451 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Atf6bO35451 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Atf6bO35451 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Atf6bO35451 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Atf6bO35451 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Atf6bO35451 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Atf6bO35451 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Atf6bO35451 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Atf6bO35451 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Atf6bO35451 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Atf6bO35451 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Atf6bO35451 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Atf6bO35451 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atf6bO35451 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atf6bO35451 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atf6bO35451 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.38■□□□□ 0.53
Atf6bO35451 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.38■□□□□ 0.53
Atf6bO35451 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atf6bO35451 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atf6bO35451 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Atf6bO35451 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atf6bO35451 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Atf6bO35451 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Atf6bO35451 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.37■□□□□ 0.53
Atf6bO35451 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.37■□□□□ 0.53
Atf6bO35451 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Atf6bO35451 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Atf6bO35451 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC18.37■□□□□ 0.53
Atf6bO35451 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Atf6bO35451 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.37■□□□□ 0.53
Atf6bO35451 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Atf6bO35451 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Atf6bO35451 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Atf6bO35451 Gm22567-201ENSMUST00000175542 342 ntBASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms