Protein–RNA interactions for Protein: O08852

Pkd1, Polycystin-1, mousemouse

Predictions only

Length 4,293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1O08852 AC153524.1-201ENSMUST00000220436 1935 ntBASIC14.05□□□□□ -0.16
Pkd1O08852 Gm10849-201ENSMUST00000100397 618 ntBASIC14.05□□□□□ -0.16
Pkd1O08852 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC14.05□□□□□ -0.16
Pkd1O08852 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pkd1O08852 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pkd1O08852 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pkd1O08852 Gm11847-201ENSMUST00000125165 1119 ntBASIC14.05□□□□□ -0.16
Pkd1O08852 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
Pkd1O08852 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Pkd1O08852 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC14.04□□□□□ -0.16
Pkd1O08852 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Pkd1O08852 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pkd1O08852 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pkd1O08852 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Pkd1O08852 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Pkd1O08852 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pkd1O08852 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pkd1O08852 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pkd1O08852 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Pkd1O08852 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pkd1O08852 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pkd1O08852 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC14.03□□□□□ -0.16
Pkd1O08852 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pkd1O08852 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pkd1O08852 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pkd1O08852 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pkd1O08852 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC14.02□□□□□ -0.17
Pkd1O08852 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Pkd1O08852 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pkd1O08852 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pkd1O08852 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pkd1O08852 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pkd1O08852 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pkd1O08852 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pkd1O08852 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pkd1O08852 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Pkd1O08852 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Pkd1O08852 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Pkd1O08852 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pkd1O08852 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pkd1O08852 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pkd1O08852 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pkd1O08852 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pkd1O08852 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Pkd1O08852 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pkd1O08852 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Pkd1O08852 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pkd1O08852 Fezf2-202ENSMUST00000224023 1917 ntBASIC13.99□□□□□ -0.17
Pkd1O08852 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC13.99□□□□□ -0.17
Pkd1O08852 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC13.99□□□□□ -0.17
Pkd1O08852 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pkd1O08852 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pkd1O08852 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pkd1O08852 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pkd1O08852 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pkd1O08852 Gm9207-201ENSMUST00000198773 1115 ntBASIC13.98□□□□□ -0.17
Pkd1O08852 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pkd1O08852 Gm28731-201ENSMUST00000185564 1569 ntBASIC13.98□□□□□ -0.17
Pkd1O08852 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pkd1O08852 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pkd1O08852 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pkd1O08852 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pkd1O08852 AC117245.4-201ENSMUST00000217388 1646 ntBASIC13.98□□□□□ -0.17
Pkd1O08852 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC13.98□□□□□ -0.17
Pkd1O08852 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pkd1O08852 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pkd1O08852 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pkd1O08852 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pkd1O08852 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pkd1O08852 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Pkd1O08852 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pkd1O08852 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
Pkd1O08852 AC122428.3-201ENSMUST00000215551 2290 ntBASIC13.97□□□□□ -0.17
Pkd1O08852 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pkd1O08852 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pkd1O08852 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC13.97□□□□□ -0.17
Pkd1O08852 Gm5874-201ENSMUST00000096101 508 ntBASIC13.97□□□□□ -0.17
Pkd1O08852 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pkd1O08852 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Pkd1O08852 AC112142.1-201ENSMUST00000228796 918 ntBASIC13.96□□□□□ -0.17
Pkd1O08852 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pkd1O08852 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pkd1O08852 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC13.96□□□□□ -0.17
Pkd1O08852 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pkd1O08852 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pkd1O08852 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pkd1O08852 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Pkd1O08852 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
Pkd1O08852 Gm26571-201ENSMUST00000181399 666 ntBASIC13.95□□□□□ -0.18
Pkd1O08852 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pkd1O08852 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Pkd1O08852 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pkd1O08852 Gm10620-201ENSMUST00000098379 1332 ntBASIC13.95□□□□□ -0.18
Pkd1O08852 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
Pkd1O08852 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pkd1O08852 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pkd1O08852 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pkd1O08852 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC13.94□□□□□ -0.18
Pkd1O08852 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC13.94□□□□□ -0.18
Pkd1O08852 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 92.3 ms