Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Shisa8J3QNX5 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.51■□□□□ 0.71
Shisa8J3QNX5 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Shisa8J3QNX5 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Shisa8J3QNX5 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Shisa8J3QNX5 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Shisa8J3QNX5 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Shisa8J3QNX5 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Shisa8J3QNX5 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Shisa8J3QNX5 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Shisa8J3QNX5 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.5■□□□□ 0.71
Shisa8J3QNX5 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC19.5■□□□□ 0.71
Shisa8J3QNX5 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Shisa8J3QNX5 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Shisa8J3QNX5 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Shisa8J3QNX5 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Shisa8J3QNX5 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Shisa8J3QNX5 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.49■□□□□ 0.71
Shisa8J3QNX5 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
Shisa8J3QNX5 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.49■□□□□ 0.71
Shisa8J3QNX5 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Shisa8J3QNX5 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.49■□□□□ 0.71
Shisa8J3QNX5 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Shisa8J3QNX5 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.48■□□□□ 0.71
Shisa8J3QNX5 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Shisa8J3QNX5 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Shisa8J3QNX5 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Shisa8J3QNX5 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.48■□□□□ 0.71
Shisa8J3QNX5 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Shisa8J3QNX5 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Shisa8J3QNX5 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Shisa8J3QNX5 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
Shisa8J3QNX5 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Shisa8J3QNX5 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Shisa8J3QNX5 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Shisa8J3QNX5 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.47■□□□□ 0.71
Shisa8J3QNX5 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Shisa8J3QNX5 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Shisa8J3QNX5 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.47■□□□□ 0.71
Shisa8J3QNX5 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Shisa8J3QNX5 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.46■□□□□ 0.71
Shisa8J3QNX5 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Shisa8J3QNX5 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Shisa8J3QNX5 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Shisa8J3QNX5 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Shisa8J3QNX5 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Shisa8J3QNX5 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Shisa8J3QNX5 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Shisa8J3QNX5 Gm8503-201ENSMUST00000118131 455 ntBASIC19.45■□□□□ 0.7
Shisa8J3QNX5 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
Shisa8J3QNX5 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Shisa8J3QNX5 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Shisa8J3QNX5 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Shisa8J3QNX5 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Shisa8J3QNX5 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Shisa8J3QNX5 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Shisa8J3QNX5 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Shisa8J3QNX5 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Shisa8J3QNX5 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Shisa8J3QNX5 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Shisa8J3QNX5 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Shisa8J3QNX5 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.44■□□□□ 0.7
Shisa8J3QNX5 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Shisa8J3QNX5 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Shisa8J3QNX5 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Shisa8J3QNX5 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Shisa8J3QNX5 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Shisa8J3QNX5 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Shisa8J3QNX5 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
Shisa8J3QNX5 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shisa8J3QNX5 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shisa8J3QNX5 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC19.43■□□□□ 0.7
Shisa8J3QNX5 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shisa8J3QNX5 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shisa8J3QNX5 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shisa8J3QNX5 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Shisa8J3QNX5 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Shisa8J3QNX5 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Shisa8J3QNX5 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.42■□□□□ 0.7
Shisa8J3QNX5 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shisa8J3QNX5 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Shisa8J3QNX5 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.41■□□□□ 0.7
Shisa8J3QNX5 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Shisa8J3QNX5 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Shisa8J3QNX5 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Shisa8J3QNX5 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Shisa8J3QNX5 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Shisa8J3QNX5 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Shisa8J3QNX5 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Shisa8J3QNX5 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Shisa8J3QNX5 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Shisa8J3QNX5 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Shisa8J3QNX5 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shisa8J3QNX5 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.39■□□□□ 0.69
Shisa8J3QNX5 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shisa8J3QNX5 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Shisa8J3QNX5 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shisa8J3QNX5 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
Shisa8J3QNX5 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
Shisa8J3QNX5 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms