Protein–RNA interactions for Protein: J3QMK1

Sgo2b, Shugoshin 2B, mousemouse

Predictions only

Length 1,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgo2bJ3QMK1 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sgo2bJ3QMK1 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.4■■□□□ 1.02
Sgo2bJ3QMK1 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Sgo2bJ3QMK1 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sgo2bJ3QMK1 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sgo2bJ3QMK1 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.4■■□□□ 1.02
Sgo2bJ3QMK1 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Sgo2bJ3QMK1 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Sgo2bJ3QMK1 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Sgo2bJ3QMK1 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
Sgo2bJ3QMK1 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Sgo2bJ3QMK1 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.39■■□□□ 1.01
Sgo2bJ3QMK1 Gm12366-201ENSMUST00000121722 873 ntBASIC21.39■■□□□ 1.01
Sgo2bJ3QMK1 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.39■■□□□ 1.01
Sgo2bJ3QMK1 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Sgo2bJ3QMK1 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Sgo2bJ3QMK1 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Sgo2bJ3QMK1 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Sgo2bJ3QMK1 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.39■■□□□ 1.01
Sgo2bJ3QMK1 Gm5786-201ENSMUST00000085368 882 ntBASIC21.39■■□□□ 1.01
Sgo2bJ3QMK1 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Sgo2bJ3QMK1 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Sgo2bJ3QMK1 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Sgo2bJ3QMK1 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Sgo2bJ3QMK1 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sgo2bJ3QMK1 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Sgo2bJ3QMK1 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Sgo2bJ3QMK1 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.38■■□□□ 1.01
Sgo2bJ3QMK1 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sgo2bJ3QMK1 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sgo2bJ3QMK1 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.37■■□□□ 1.01
Sgo2bJ3QMK1 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.37■■□□□ 1.01
Sgo2bJ3QMK1 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sgo2bJ3QMK1 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.37■■□□□ 1.01
Sgo2bJ3QMK1 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Sgo2bJ3QMK1 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sgo2bJ3QMK1 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Sgo2bJ3QMK1 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sgo2bJ3QMK1 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Sgo2bJ3QMK1 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
Sgo2bJ3QMK1 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sgo2bJ3QMK1 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Sgo2bJ3QMK1 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Sgo2bJ3QMK1 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sgo2bJ3QMK1 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sgo2bJ3QMK1 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sgo2bJ3QMK1 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.36■■□□□ 1.01
Sgo2bJ3QMK1 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sgo2bJ3QMK1 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Sgo2bJ3QMK1 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sgo2bJ3QMK1 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Sgo2bJ3QMK1 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sgo2bJ3QMK1 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.35■■□□□ 1.01
Sgo2bJ3QMK1 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sgo2bJ3QMK1 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sgo2bJ3QMK1 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sgo2bJ3QMK1 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sgo2bJ3QMK1 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sgo2bJ3QMK1 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Sgo2bJ3QMK1 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sgo2bJ3QMK1 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sgo2bJ3QMK1 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sgo2bJ3QMK1 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Sgo2bJ3QMK1 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sgo2bJ3QMK1 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Sgo2bJ3QMK1 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sgo2bJ3QMK1 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Sgo2bJ3QMK1 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.33■■□□□ 1.01
Sgo2bJ3QMK1 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.33■■□□□ 1
Sgo2bJ3QMK1 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Sgo2bJ3QMK1 Cap2-205ENSMUST00000225824 1634 ntBASIC21.33■■□□□ 1
Sgo2bJ3QMK1 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Sgo2bJ3QMK1 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.32■■□□□ 1
Sgo2bJ3QMK1 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.32■■□□□ 1
Sgo2bJ3QMK1 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.31■■□□□ 1
Sgo2bJ3QMK1 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sgo2bJ3QMK1 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.31■■□□□ 1
Sgo2bJ3QMK1 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sgo2bJ3QMK1 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sgo2bJ3QMK1 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sgo2bJ3QMK1 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sgo2bJ3QMK1 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.3■■□□□ 1
Sgo2bJ3QMK1 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.3■■□□□ 1
Sgo2bJ3QMK1 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.3■■□□□ 1
Sgo2bJ3QMK1 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sgo2bJ3QMK1 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.3■■□□□ 1
Sgo2bJ3QMK1 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sgo2bJ3QMK1 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sgo2bJ3QMK1 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.29■■□□□ 1
Sgo2bJ3QMK1 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.29■■□□□ 1
Sgo2bJ3QMK1 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.29■■□□□ 1
Sgo2bJ3QMK1 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.29■■□□□ 1
Sgo2bJ3QMK1 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sgo2bJ3QMK1 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.29■■□□□ 1
Sgo2bJ3QMK1 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Sgo2bJ3QMK1 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.28■■□□□ 1
Sgo2bJ3QMK1 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.28■■□□□ 1
Sgo2bJ3QMK1 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sgo2bJ3QMK1 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.27■■□□□ 1
Sgo2bJ3QMK1 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms