Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
Ube4aE9Q735 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Ube4aE9Q735 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Ube4aE9Q735 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC26.19■■□□□ 1.78
Ube4aE9Q735 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Ube4aE9Q735 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC26.19■■□□□ 1.78
Ube4aE9Q735 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Ube4aE9Q735 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Ube4aE9Q735 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC26.19■■□□□ 1.78
Ube4aE9Q735 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Ube4aE9Q735 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Ube4aE9Q735 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Ube4aE9Q735 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Ube4aE9Q735 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Ube4aE9Q735 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Ube4aE9Q735 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC26.17■■□□□ 1.78
Ube4aE9Q735 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Ube4aE9Q735 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Ube4aE9Q735 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Ube4aE9Q735 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Ube4aE9Q735 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Ube4aE9Q735 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Ube4aE9Q735 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Ube4aE9Q735 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Ube4aE9Q735 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Ube4aE9Q735 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
Ube4aE9Q735 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
Ube4aE9Q735 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Ube4aE9Q735 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
Ube4aE9Q735 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC26.15■■□□□ 1.78
Ube4aE9Q735 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Ube4aE9Q735 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
Ube4aE9Q735 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC26.15■■□□□ 1.78
Ube4aE9Q735 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC26.15■■□□□ 1.78
Ube4aE9Q735 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
Ube4aE9Q735 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Ube4aE9Q735 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Ube4aE9Q735 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Ube4aE9Q735 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.77
Ube4aE9Q735 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.77
Ube4aE9Q735 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.77
Ube4aE9Q735 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Ube4aE9Q735 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Ube4aE9Q735 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Ube4aE9Q735 Gm13241-201ENSMUST00000094493 780 ntBASIC26.11■■□□□ 1.77
Ube4aE9Q735 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Ube4aE9Q735 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Ube4aE9Q735 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Ube4aE9Q735 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Ube4aE9Q735 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC26.1■■□□□ 1.77
Ube4aE9Q735 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Ube4aE9Q735 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Ube4aE9Q735 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
Ube4aE9Q735 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC26.09■■□□□ 1.77
Ube4aE9Q735 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Ube4aE9Q735 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC26.08■■□□□ 1.77
Ube4aE9Q735 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
Ube4aE9Q735 Gm9847-201ENSMUST00000052528 599 ntBASIC26.08■■□□□ 1.77
Ube4aE9Q735 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Ube4aE9Q735 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Ube4aE9Q735 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
Ube4aE9Q735 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Ube4aE9Q735 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Ube4aE9Q735 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Ube4aE9Q735 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Ube4aE9Q735 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Ube4aE9Q735 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Ube4aE9Q735 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Ube4aE9Q735 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Ube4aE9Q735 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC26.05■■□□□ 1.76
Ube4aE9Q735 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Ube4aE9Q735 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
Ube4aE9Q735 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Ube4aE9Q735 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
Ube4aE9Q735 Gm10620-201ENSMUST00000098379 1332 ntBASIC26.04■■□□□ 1.76
Ube4aE9Q735 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Ube4aE9Q735 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC26.03■■□□□ 1.76
Ube4aE9Q735 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
Ube4aE9Q735 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC26.02■■□□□ 1.76
Ube4aE9Q735 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
Ube4aE9Q735 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
Ube4aE9Q735 Gm12922-201ENSMUST00000120626 809 ntBASIC26.02■■□□□ 1.76
Ube4aE9Q735 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Ube4aE9Q735 Gm43034-201ENSMUST00000198678 1364 ntBASIC26.02■■□□□ 1.76
Ube4aE9Q735 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Ube4aE9Q735 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
Ube4aE9Q735 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Ube4aE9Q735 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
Ube4aE9Q735 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Ube4aE9Q735 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
Ube4aE9Q735 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Ube4aE9Q735 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC26■■□□□ 1.75
Ube4aE9Q735 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC26■■□□□ 1.75
Ube4aE9Q735 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC26■■□□□ 1.75
Ube4aE9Q735 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Ube4aE9Q735 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Ube4aE9Q735 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Ube4aE9Q735 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Ube4aE9Q735 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC25.99■■□□□ 1.75
Ube4aE9Q735 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC25.99■■□□□ 1.75
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms