Protein–RNA interactions for Protein: E9Q555

Rnf213, E3 ubiquitin-protein ligase RNF213, mousemouse

Known RBP Predictions only

Length 5,152 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf213E9Q555 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC10.81□□□□□ -0.68
Rnf213E9Q555 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rnf213E9Q555 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC10.81□□□□□ -0.68
Rnf213E9Q555 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC10.81□□□□□ -0.68
Rnf213E9Q555 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Rnf213E9Q555 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rnf213E9Q555 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rnf213E9Q555 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC10.8□□□□□ -0.68
Rnf213E9Q555 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Rnf213E9Q555 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Rnf213E9Q555 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Rnf213E9Q555 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC10.8□□□□□ -0.68
Rnf213E9Q555 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rnf213E9Q555 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rnf213E9Q555 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rnf213E9Q555 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rnf213E9Q555 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rnf213E9Q555 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC10.79□□□□□ -0.68
Rnf213E9Q555 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rnf213E9Q555 Wdr70-203ENSMUST00000227371 1130 ntBASIC10.79□□□□□ -0.68
Rnf213E9Q555 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rnf213E9Q555 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC10.79□□□□□ -0.68
Rnf213E9Q555 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rnf213E9Q555 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC10.79□□□□□ -0.68
Rnf213E9Q555 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rnf213E9Q555 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Rnf213E9Q555 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rnf213E9Q555 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Rnf213E9Q555 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC10.78□□□□□ -0.68
Rnf213E9Q555 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rnf213E9Q555 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rnf213E9Q555 Gm42569-201ENSMUST00000200539 472 ntBASIC10.78□□□□□ -0.68
Rnf213E9Q555 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rnf213E9Q555 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rnf213E9Q555 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Rnf213E9Q555 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rnf213E9Q555 Zxda-201ENSMUST00000117281 2621 ntBASIC10.78□□□□□ -0.68
Rnf213E9Q555 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Rnf213E9Q555 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Rnf213E9Q555 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Rnf213E9Q555 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Rnf213E9Q555 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Rnf213E9Q555 Gm10399-202ENSMUST00000202768 748 ntBASIC10.77□□□□□ -0.69
Rnf213E9Q555 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rnf213E9Q555 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rnf213E9Q555 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC10.77□□□□□ -0.69
Rnf213E9Q555 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rnf213E9Q555 Gm28536-201ENSMUST00000190971 1317 ntBASIC10.77□□□□□ -0.69
Rnf213E9Q555 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Rnf213E9Q555 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rnf213E9Q555 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rnf213E9Q555 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Rnf213E9Q555 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rnf213E9Q555 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rnf213E9Q555 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC10.76□□□□□ -0.69
Rnf213E9Q555 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rnf213E9Q555 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rnf213E9Q555 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rnf213E9Q555 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC10.75□□□□□ -0.69
Rnf213E9Q555 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rnf213E9Q555 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rnf213E9Q555 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rnf213E9Q555 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rnf213E9Q555 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rnf213E9Q555 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC10.75□□□□□ -0.69
Rnf213E9Q555 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC10.75□□□□□ -0.69
Rnf213E9Q555 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC10.75□□□□□ -0.69
Rnf213E9Q555 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC10.74□□□□□ -0.69
Rnf213E9Q555 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rnf213E9Q555 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rnf213E9Q555 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC10.74□□□□□ -0.69
Rnf213E9Q555 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC10.74□□□□□ -0.69
Rnf213E9Q555 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Rnf213E9Q555 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rnf213E9Q555 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Rnf213E9Q555 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rnf213E9Q555 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Rnf213E9Q555 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC10.73□□□□□ -0.69
Rnf213E9Q555 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Rnf213E9Q555 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Rnf213E9Q555 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC10.73□□□□□ -0.69
Rnf213E9Q555 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rnf213E9Q555 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Rnf213E9Q555 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rnf213E9Q555 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC10.73□□□□□ -0.69
Rnf213E9Q555 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Rnf213E9Q555 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rnf213E9Q555 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rnf213E9Q555 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Rnf213E9Q555 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC10.73□□□□□ -0.69
Rnf213E9Q555 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC10.72□□□□□ -0.69
Rnf213E9Q555 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Rnf213E9Q555 Gm11847-201ENSMUST00000125165 1119 ntBASIC10.72□□□□□ -0.69
Rnf213E9Q555 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC10.72□□□□□ -0.69
Rnf213E9Q555 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rnf213E9Q555 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Rnf213E9Q555 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Rnf213E9Q555 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rnf213E9Q555 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rnf213E9Q555 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms