Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC12.68□□□□□ -0.38
Herc1E9PZP8 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC12.68□□□□□ -0.38
Herc1E9PZP8 Gm10602-201ENSMUST00000098239 609 ntBASIC12.68□□□□□ -0.38
Herc1E9PZP8 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Herc1E9PZP8 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC12.68□□□□□ -0.38
Herc1E9PZP8 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Herc1E9PZP8 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Herc1E9PZP8 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Herc1E9PZP8 Mir7075-201ENSMUST00000184187 82 ntBASIC12.67□□□□□ -0.38
Herc1E9PZP8 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC12.67□□□□□ -0.38
Herc1E9PZP8 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Herc1E9PZP8 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Herc1E9PZP8 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Herc1E9PZP8 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Herc1E9PZP8 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Herc1E9PZP8 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Herc1E9PZP8 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Herc1E9PZP8 Gm10129-202ENSMUST00000193100 1316 ntBASIC12.67□□□□□ -0.38
Herc1E9PZP8 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Herc1E9PZP8 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC12.66□□□□□ -0.38
Herc1E9PZP8 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Herc1E9PZP8 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Herc1E9PZP8 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Herc1E9PZP8 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Herc1E9PZP8 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Herc1E9PZP8 Gm10653-202ENSMUST00000139570 835 ntBASIC12.65□□□□□ -0.38
Herc1E9PZP8 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC12.65□□□□□ -0.38
Herc1E9PZP8 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Herc1E9PZP8 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC12.65□□□□□ -0.39
Herc1E9PZP8 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Herc1E9PZP8 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Herc1E9PZP8 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Herc1E9PZP8 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Herc1E9PZP8 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Herc1E9PZP8 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Herc1E9PZP8 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Herc1E9PZP8 Gm22240-201ENSMUST00000175225 82 ntBASIC12.63□□□□□ -0.39
Herc1E9PZP8 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC12.63□□□□□ -0.39
Herc1E9PZP8 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Herc1E9PZP8 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Herc1E9PZP8 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Herc1E9PZP8 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC12.63□□□□□ -0.39
Herc1E9PZP8 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Herc1E9PZP8 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC12.63□□□□□ -0.39
Herc1E9PZP8 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC12.63□□□□□ -0.39
Herc1E9PZP8 AC099934.2-201ENSMUST00000196389 70 ntBASIC12.63□□□□□ -0.39
Herc1E9PZP8 AC156953.1-201ENSMUST00000196953 70 ntBASIC12.63□□□□□ -0.39
Herc1E9PZP8 AC157822.2-201ENSMUST00000200291 70 ntBASIC12.63□□□□□ -0.39
Herc1E9PZP8 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Herc1E9PZP8 Gm6658-202ENSMUST00000209493 1885 ntBASIC12.63□□□□□ -0.39
Herc1E9PZP8 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Herc1E9PZP8 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Herc1E9PZP8 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC12.63□□□□□ -0.39
Herc1E9PZP8 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC12.63□□□□□ -0.39
Herc1E9PZP8 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Herc1E9PZP8 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Herc1E9PZP8 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Herc1E9PZP8 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Herc1E9PZP8 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Herc1E9PZP8 Cdc34b-202ENSMUST00000188741 1252 ntBASIC12.62□□□□□ -0.39
Herc1E9PZP8 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Herc1E9PZP8 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Herc1E9PZP8 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Herc1E9PZP8 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Herc1E9PZP8 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Herc1E9PZP8 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC12.62□□□□□ -0.39
Herc1E9PZP8 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Herc1E9PZP8 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Herc1E9PZP8 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Herc1E9PZP8 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Herc1E9PZP8 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Herc1E9PZP8 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Herc1E9PZP8 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Herc1E9PZP8 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Herc1E9PZP8 Gm43137-201ENSMUST00000198052 594 ntBASIC12.61□□□□□ -0.39
Herc1E9PZP8 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Herc1E9PZP8 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Herc1E9PZP8 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Herc1E9PZP8 Gm8493-201ENSMUST00000196881 489 ntBASIC12.6□□□□□ -0.39
Herc1E9PZP8 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Herc1E9PZP8 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Herc1E9PZP8 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Herc1E9PZP8 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC12.6□□□□□ -0.39
Herc1E9PZP8 Gm10033-202ENSMUST00000211874 928 ntBASIC12.6□□□□□ -0.39
Herc1E9PZP8 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Herc1E9PZP8 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Herc1E9PZP8 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Herc1E9PZP8 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC12.59□□□□□ -0.39
Herc1E9PZP8 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Herc1E9PZP8 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC12.59□□□□□ -0.39
Herc1E9PZP8 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC12.59□□□□□ -0.39
Herc1E9PZP8 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Herc1E9PZP8 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Herc1E9PZP8 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Herc1E9PZP8 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Herc1E9PZP8 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC12.59□□□□□ -0.39
Herc1E9PZP8 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Herc1E9PZP8 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Herc1E9PZP8 Gm12933-201ENSMUST00000120203 872 ntBASIC12.58□□□□□ -0.4
Herc1E9PZP8 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms