Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC12.68□□□□□ -0.38
Herc1E9PZP8 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC12.68□□□□□ -0.38
Herc1E9PZP8 Gm10602-201ENSMUST00000098239 609 ntBASIC12.68□□□□□ -0.38
Herc1E9PZP8 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Herc1E9PZP8 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC12.68□□□□□ -0.38
Herc1E9PZP8 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Herc1E9PZP8 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Herc1E9PZP8 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Herc1E9PZP8 Mir7075-201ENSMUST00000184187 82 ntBASIC12.67□□□□□ -0.38
Herc1E9PZP8 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC12.67□□□□□ -0.38
Herc1E9PZP8 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Herc1E9PZP8 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Herc1E9PZP8 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Herc1E9PZP8 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Herc1E9PZP8 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Herc1E9PZP8 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Herc1E9PZP8 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Herc1E9PZP8 Gm10129-202ENSMUST00000193100 1316 ntBASIC12.67□□□□□ -0.38
Herc1E9PZP8 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Herc1E9PZP8 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC12.66□□□□□ -0.38
Herc1E9PZP8 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Herc1E9PZP8 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Herc1E9PZP8 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Herc1E9PZP8 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Herc1E9PZP8 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Herc1E9PZP8 Gm10653-202ENSMUST00000139570 835 ntBASIC12.65□□□□□ -0.38
Herc1E9PZP8 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC12.65□□□□□ -0.38
Herc1E9PZP8 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Herc1E9PZP8 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC12.65□□□□□ -0.39
Herc1E9PZP8 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Herc1E9PZP8 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Herc1E9PZP8 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Herc1E9PZP8 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Herc1E9PZP8 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Herc1E9PZP8 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Herc1E9PZP8 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Herc1E9PZP8 Gm22240-201ENSMUST00000175225 82 ntBASIC12.63□□□□□ -0.39
Herc1E9PZP8 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC12.63□□□□□ -0.39
Herc1E9PZP8 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Herc1E9PZP8 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Herc1E9PZP8 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Herc1E9PZP8 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC12.63□□□□□ -0.39
Herc1E9PZP8 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Herc1E9PZP8 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC12.63□□□□□ -0.39
Herc1E9PZP8 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC12.63□□□□□ -0.39
Herc1E9PZP8 AC099934.2-201ENSMUST00000196389 70 ntBASIC12.63□□□□□ -0.39
Herc1E9PZP8 AC156953.1-201ENSMUST00000196953 70 ntBASIC12.63□□□□□ -0.39
Herc1E9PZP8 AC157822.2-201ENSMUST00000200291 70 ntBASIC12.63□□□□□ -0.39
Herc1E9PZP8 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Herc1E9PZP8 Gm6658-202ENSMUST00000209493 1885 ntBASIC12.63□□□□□ -0.39
Herc1E9PZP8 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Herc1E9PZP8 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Herc1E9PZP8 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC12.63□□□□□ -0.39
Herc1E9PZP8 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC12.63□□□□□ -0.39
Herc1E9PZP8 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Herc1E9PZP8 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Herc1E9PZP8 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Herc1E9PZP8 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Herc1E9PZP8 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Herc1E9PZP8 Cdc34b-202ENSMUST00000188741 1252 ntBASIC12.62□□□□□ -0.39
Herc1E9PZP8 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Herc1E9PZP8 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Herc1E9PZP8 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Herc1E9PZP8 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Herc1E9PZP8 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Herc1E9PZP8 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC12.62□□□□□ -0.39
Herc1E9PZP8 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Herc1E9PZP8 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Herc1E9PZP8 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Herc1E9PZP8 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Herc1E9PZP8 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Herc1E9PZP8 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Herc1E9PZP8 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Herc1E9PZP8 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Herc1E9PZP8 Gm43137-201ENSMUST00000198052 594 ntBASIC12.61□□□□□ -0.39
Herc1E9PZP8 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Herc1E9PZP8 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Herc1E9PZP8 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Herc1E9PZP8 Gm8493-201ENSMUST00000196881 489 ntBASIC12.6□□□□□ -0.39
Herc1E9PZP8 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Herc1E9PZP8 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Herc1E9PZP8 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Herc1E9PZP8 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC12.6□□□□□ -0.39
Herc1E9PZP8 Gm10033-202ENSMUST00000211874 928 ntBASIC12.6□□□□□ -0.39
Herc1E9PZP8 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Herc1E9PZP8 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Herc1E9PZP8 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Herc1E9PZP8 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC12.59□□□□□ -0.39
Herc1E9PZP8 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Herc1E9PZP8 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC12.59□□□□□ -0.39
Herc1E9PZP8 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC12.59□□□□□ -0.39
Herc1E9PZP8 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Herc1E9PZP8 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Herc1E9PZP8 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Herc1E9PZP8 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Herc1E9PZP8 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC12.59□□□□□ -0.39
Herc1E9PZP8 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Herc1E9PZP8 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Herc1E9PZP8 Gm12933-201ENSMUST00000120203 872 ntBASIC12.58□□□□□ -0.4
Herc1E9PZP8 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms