Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdh17E9PXF0 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdh17E9PXF0 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdh17E9PXF0 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdh17E9PXF0 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdh17E9PXF0 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.91■□□□□ 0.78
Pcdh17E9PXF0 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Pcdh17E9PXF0 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdh17E9PXF0 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdh17E9PXF0 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdh17E9PXF0 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdh17E9PXF0 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdh17E9PXF0 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Pcdh17E9PXF0 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdh17E9PXF0 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdh17E9PXF0 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdh17E9PXF0 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdh17E9PXF0 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.9■□□□□ 0.78
Pcdh17E9PXF0 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdh17E9PXF0 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdh17E9PXF0 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdh17E9PXF0 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Pcdh17E9PXF0 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdh17E9PXF0 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.89■□□□□ 0.77
Pcdh17E9PXF0 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Pcdh17E9PXF0 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
Pcdh17E9PXF0 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.88■□□□□ 0.77
Pcdh17E9PXF0 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.88■□□□□ 0.77
Pcdh17E9PXF0 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.88■□□□□ 0.77
Pcdh17E9PXF0 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdh17E9PXF0 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdh17E9PXF0 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.88■□□□□ 0.77
Pcdh17E9PXF0 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdh17E9PXF0 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdh17E9PXF0 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.87■□□□□ 0.77
Pcdh17E9PXF0 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdh17E9PXF0 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdh17E9PXF0 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdh17E9PXF0 Gm15039-201ENSMUST00000118914 875 ntBASIC19.86■□□□□ 0.77
Pcdh17E9PXF0 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.86■□□□□ 0.77
Pcdh17E9PXF0 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.86■□□□□ 0.77
Pcdh17E9PXF0 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdh17E9PXF0 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdh17E9PXF0 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdh17E9PXF0 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdh17E9PXF0 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdh17E9PXF0 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdh17E9PXF0 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdh17E9PXF0 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdh17E9PXF0 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Pcdh17E9PXF0 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.85■□□□□ 0.77
Pcdh17E9PXF0 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.85■□□□□ 0.77
Pcdh17E9PXF0 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdh17E9PXF0 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdh17E9PXF0 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdh17E9PXF0 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdh17E9PXF0 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdh17E9PXF0 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.84■□□□□ 0.77
Pcdh17E9PXF0 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdh17E9PXF0 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdh17E9PXF0 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdh17E9PXF0 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.83■□□□□ 0.77
Pcdh17E9PXF0 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.83■□□□□ 0.77
Pcdh17E9PXF0 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.83■□□□□ 0.77
Pcdh17E9PXF0 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdh17E9PXF0 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdh17E9PXF0 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.82■□□□□ 0.76
Pcdh17E9PXF0 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdh17E9PXF0 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdh17E9PXF0 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdh17E9PXF0 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdh17E9PXF0 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdh17E9PXF0 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdh17E9PXF0 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdh17E9PXF0 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.81■□□□□ 0.76
Pcdh17E9PXF0 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.81■□□□□ 0.76
Pcdh17E9PXF0 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.81■□□□□ 0.76
Pcdh17E9PXF0 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.81■□□□□ 0.76
Pcdh17E9PXF0 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Pcdh17E9PXF0 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdh17E9PXF0 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Pcdh17E9PXF0 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdh17E9PXF0 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.81■□□□□ 0.76
Pcdh17E9PXF0 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdh17E9PXF0 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdh17E9PXF0 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdh17E9PXF0 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.8■□□□□ 0.76
Pcdh17E9PXF0 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdh17E9PXF0 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdh17E9PXF0 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.8■□□□□ 0.76
Pcdh17E9PXF0 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
Pcdh17E9PXF0 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdh17E9PXF0 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Pcdh17E9PXF0 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdh17E9PXF0 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Pcdh17E9PXF0 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdh17E9PXF0 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.79■□□□□ 0.76
Pcdh17E9PXF0 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdh17E9PXF0 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdh17E9PXF0 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms