Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Ccdc194A0A140LIT1 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Ccdc194A0A140LIT1 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Ccdc194A0A140LIT1 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ccdc194A0A140LIT1 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.3■■□□□ 1
Ccdc194A0A140LIT1 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ccdc194A0A140LIT1 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ccdc194A0A140LIT1 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.3■■□□□ 1
Ccdc194A0A140LIT1 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ccdc194A0A140LIT1 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Ccdc194A0A140LIT1 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ccdc194A0A140LIT1 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ccdc194A0A140LIT1 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ccdc194A0A140LIT1 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.29■■□□□ 1
Ccdc194A0A140LIT1 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ccdc194A0A140LIT1 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Ccdc194A0A140LIT1 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Ccdc194A0A140LIT1 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ccdc194A0A140LIT1 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ccdc194A0A140LIT1 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.29■■□□□ 1
Ccdc194A0A140LIT1 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
Ccdc194A0A140LIT1 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Ccdc194A0A140LIT1 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ccdc194A0A140LIT1 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.28■■□□□ 1
Ccdc194A0A140LIT1 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ccdc194A0A140LIT1 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ccdc194A0A140LIT1 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Ccdc194A0A140LIT1 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Ccdc194A0A140LIT1 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ccdc194A0A140LIT1 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ccdc194A0A140LIT1 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
Ccdc194A0A140LIT1 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ccdc194A0A140LIT1 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ccdc194A0A140LIT1 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ccdc194A0A140LIT1 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Ccdc194A0A140LIT1 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ccdc194A0A140LIT1 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Ccdc194A0A140LIT1 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.26■□□□□ 0.99
Ccdc194A0A140LIT1 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Ccdc194A0A140LIT1 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Ccdc194A0A140LIT1 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc194A0A140LIT1 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc194A0A140LIT1 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc194A0A140LIT1 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.26■□□□□ 0.99
Ccdc194A0A140LIT1 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc194A0A140LIT1 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc194A0A140LIT1 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc194A0A140LIT1 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc194A0A140LIT1 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc194A0A140LIT1 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc194A0A140LIT1 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Ccdc194A0A140LIT1 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.25■□□□□ 0.99
Ccdc194A0A140LIT1 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc194A0A140LIT1 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.25■□□□□ 0.99
Ccdc194A0A140LIT1 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.25■□□□□ 0.99
Ccdc194A0A140LIT1 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc194A0A140LIT1 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc194A0A140LIT1 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc194A0A140LIT1 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.25■□□□□ 0.99
Ccdc194A0A140LIT1 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc194A0A140LIT1 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc194A0A140LIT1 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc194A0A140LIT1 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc194A0A140LIT1 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc194A0A140LIT1 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc194A0A140LIT1 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc194A0A140LIT1 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.24■□□□□ 0.99
Ccdc194A0A140LIT1 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc194A0A140LIT1 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc194A0A140LIT1 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc194A0A140LIT1 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc194A0A140LIT1 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc194A0A140LIT1 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc194A0A140LIT1 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc194A0A140LIT1 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc194A0A140LIT1 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc194A0A140LIT1 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc194A0A140LIT1 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc194A0A140LIT1 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc194A0A140LIT1 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc194A0A140LIT1 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc194A0A140LIT1 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.22■□□□□ 0.99
Ccdc194A0A140LIT1 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc194A0A140LIT1 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.21■□□□□ 0.99
Ccdc194A0A140LIT1 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Ccdc194A0A140LIT1 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.21■□□□□ 0.99
Ccdc194A0A140LIT1 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc194A0A140LIT1 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc194A0A140LIT1 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc194A0A140LIT1 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Ccdc194A0A140LIT1 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Ccdc194A0A140LIT1 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc194A0A140LIT1 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc194A0A140LIT1 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc194A0A140LIT1 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc194A0A140LIT1 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.19■□□□□ 0.98
Ccdc194A0A140LIT1 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Ccdc194A0A140LIT1 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.19■□□□□ 0.98
Ccdc194A0A140LIT1 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc194A0A140LIT1 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms