Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv29A0A0G2LB96 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv29A0A0G2LB96 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv29A0A0G2LB96 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv29A0A0G2LB96 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trbv29A0A0G2LB96 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trbv29A0A0G2LB96 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Trbv29A0A0G2LB96 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trbv29A0A0G2LB96 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trbv29A0A0G2LB96 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trbv29A0A0G2LB96 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC17.8■□□□□ 0.44
Trbv29A0A0G2LB96 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trbv29A0A0G2LB96 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trbv29A0A0G2LB96 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trbv29A0A0G2LB96 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.79■□□□□ 0.44
Trbv29A0A0G2LB96 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trbv29A0A0G2LB96 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
Trbv29A0A0G2LB96 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Trbv29A0A0G2LB96 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trbv29A0A0G2LB96 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trbv29A0A0G2LB96 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trbv29A0A0G2LB96 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trbv29A0A0G2LB96 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trbv29A0A0G2LB96 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Trbv29A0A0G2LB96 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trbv29A0A0G2LB96 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trbv29A0A0G2LB96 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.78■□□□□ 0.44
Trbv29A0A0G2LB96 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trbv29A0A0G2LB96 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trbv29A0A0G2LB96 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trbv29A0A0G2LB96 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trbv29A0A0G2LB96 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.77■□□□□ 0.44
Trbv29A0A0G2LB96 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Trbv29A0A0G2LB96 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC17.77■□□□□ 0.44
Trbv29A0A0G2LB96 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trbv29A0A0G2LB96 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
Trbv29A0A0G2LB96 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.77■□□□□ 0.43
Trbv29A0A0G2LB96 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trbv29A0A0G2LB96 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Trbv29A0A0G2LB96 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trbv29A0A0G2LB96 AC117769.4-201ENSMUST00000225679 685 ntBASIC17.76■□□□□ 0.43
Trbv29A0A0G2LB96 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trbv29A0A0G2LB96 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trbv29A0A0G2LB96 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trbv29A0A0G2LB96 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trbv29A0A0G2LB96 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Trbv29A0A0G2LB96 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trbv29A0A0G2LB96 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Trbv29A0A0G2LB96 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Trbv29A0A0G2LB96 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC17.75■□□□□ 0.43
Trbv29A0A0G2LB96 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trbv29A0A0G2LB96 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trbv29A0A0G2LB96 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trbv29A0A0G2LB96 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC17.75■□□□□ 0.43
Trbv29A0A0G2LB96 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trbv29A0A0G2LB96 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trbv29A0A0G2LB96 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Trbv29A0A0G2LB96 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trbv29A0A0G2LB96 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trbv29A0A0G2LB96 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trbv29A0A0G2LB96 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC17.74■□□□□ 0.43
Trbv29A0A0G2LB96 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trbv29A0A0G2LB96 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trbv29A0A0G2LB96 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv29A0A0G2LB96 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv29A0A0G2LB96 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv29A0A0G2LB96 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
Trbv29A0A0G2LB96 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv29A0A0G2LB96 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv29A0A0G2LB96 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC17.73■□□□□ 0.43
Trbv29A0A0G2LB96 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv29A0A0G2LB96 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC17.73■□□□□ 0.43
Trbv29A0A0G2LB96 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv29A0A0G2LB96 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Trbv29A0A0G2LB96 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv29A0A0G2LB96 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv29A0A0G2LB96 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv29A0A0G2LB96 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC17.72■□□□□ 0.43
Trbv29A0A0G2LB96 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC17.72■□□□□ 0.43
Trbv29A0A0G2LB96 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
Trbv29A0A0G2LB96 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv29A0A0G2LB96 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv29A0A0G2LB96 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv29A0A0G2LB96 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv29A0A0G2LB96 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv29A0A0G2LB96 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv29A0A0G2LB96 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Trbv29A0A0G2LB96 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv29A0A0G2LB96 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Trbv29A0A0G2LB96 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv29A0A0G2LB96 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv29A0A0G2LB96 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv29A0A0G2LB96 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv29A0A0G2LB96 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC17.7■□□□□ 0.42
Trbv29A0A0G2LB96 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Trbv29A0A0G2LB96 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv29A0A0G2LB96 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv29A0A0G2LB96 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv29A0A0G2LB96 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv29A0A0G2LB96 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 238.9 ms