Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm11687-201ENSMUST00000118911 886 ntBASIC18.84■□□□□ 0.61
Trav15d-2-dv6d-2A0A0G2JGQ7 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav15d-2-dv6d-2A0A0G2JGQ7 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav15d-2-dv6d-2A0A0G2JGQ7 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.84■□□□□ 0.61
Trav15d-2-dv6d-2A0A0G2JGQ7 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trav15d-2-dv6d-2A0A0G2JGQ7 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trav15d-2-dv6d-2A0A0G2JGQ7 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC18.83■□□□□ 0.61
Trav15d-2-dv6d-2A0A0G2JGQ7 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trav15d-2-dv6d-2A0A0G2JGQ7 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trav15d-2-dv6d-2A0A0G2JGQ7 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trav15d-2-dv6d-2A0A0G2JGQ7 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav15d-2-dv6d-2A0A0G2JGQ7 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav15d-2-dv6d-2A0A0G2JGQ7 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trav15d-2-dv6d-2A0A0G2JGQ7 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Trav15d-2-dv6d-2A0A0G2JGQ7 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.81■□□□□ 0.6
Trav15d-2-dv6d-2A0A0G2JGQ7 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trav15d-2-dv6d-2A0A0G2JGQ7 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trav15d-2-dv6d-2A0A0G2JGQ7 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.81■□□□□ 0.6
Trav15d-2-dv6d-2A0A0G2JGQ7 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav15d-2-dv6d-2A0A0G2JGQ7 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.81■□□□□ 0.6
Trav15d-2-dv6d-2A0A0G2JGQ7 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Trav15d-2-dv6d-2A0A0G2JGQ7 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav15d-2-dv6d-2A0A0G2JGQ7 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav15d-2-dv6d-2A0A0G2JGQ7 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav15d-2-dv6d-2A0A0G2JGQ7 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav15d-2-dv6d-2A0A0G2JGQ7 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Trav15d-2-dv6d-2A0A0G2JGQ7 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav15d-2-dv6d-2A0A0G2JGQ7 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav15d-2-dv6d-2A0A0G2JGQ7 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav15d-2-dv6d-2A0A0G2JGQ7 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.78■□□□□ 0.6
Trav15d-2-dv6d-2A0A0G2JGQ7 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC18.78■□□□□ 0.6
Trav15d-2-dv6d-2A0A0G2JGQ7 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav15d-2-dv6d-2A0A0G2JGQ7 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav15d-2-dv6d-2A0A0G2JGQ7 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trav15d-2-dv6d-2A0A0G2JGQ7 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Trav15d-2-dv6d-2A0A0G2JGQ7 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC18.77■□□□□ 0.6
Trav15d-2-dv6d-2A0A0G2JGQ7 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav15d-2-dv6d-2A0A0G2JGQ7 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav15d-2-dv6d-2A0A0G2JGQ7 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav15d-2-dv6d-2A0A0G2JGQ7 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Trav15d-2-dv6d-2A0A0G2JGQ7 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.77■□□□□ 0.59
Trav15d-2-dv6d-2A0A0G2JGQ7 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Trav15d-2-dv6d-2A0A0G2JGQ7 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Trav15d-2-dv6d-2A0A0G2JGQ7 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trav15d-2-dv6d-2A0A0G2JGQ7 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav15d-2-dv6d-2A0A0G2JGQ7 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trav15d-2-dv6d-2A0A0G2JGQ7 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav15d-2-dv6d-2A0A0G2JGQ7 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Trav15d-2-dv6d-2A0A0G2JGQ7 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav15d-2-dv6d-2A0A0G2JGQ7 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav15d-2-dv6d-2A0A0G2JGQ7 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trav15d-2-dv6d-2A0A0G2JGQ7 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav15d-2-dv6d-2A0A0G2JGQ7 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.76■□□□□ 0.59
Trav15d-2-dv6d-2A0A0G2JGQ7 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Trav15d-2-dv6d-2A0A0G2JGQ7 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav15d-2-dv6d-2A0A0G2JGQ7 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav15d-2-dv6d-2A0A0G2JGQ7 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trav15d-2-dv6d-2A0A0G2JGQ7 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav15d-2-dv6d-2A0A0G2JGQ7 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav15d-2-dv6d-2A0A0G2JGQ7 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Trav15d-2-dv6d-2A0A0G2JGQ7 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Trav15d-2-dv6d-2A0A0G2JGQ7 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav15d-2-dv6d-2A0A0G2JGQ7 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav15d-2-dv6d-2A0A0G2JGQ7 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav15d-2-dv6d-2A0A0G2JGQ7 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav15d-2-dv6d-2A0A0G2JGQ7 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav15d-2-dv6d-2A0A0G2JGQ7 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav15d-2-dv6d-2A0A0G2JGQ7 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trav15d-2-dv6d-2A0A0G2JGQ7 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav15d-2-dv6d-2A0A0G2JGQ7 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav15d-2-dv6d-2A0A0G2JGQ7 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav15d-2-dv6d-2A0A0G2JGQ7 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav15d-2-dv6d-2A0A0G2JGQ7 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav15d-2-dv6d-2A0A0G2JGQ7 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav15d-2-dv6d-2A0A0G2JGQ7 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav15d-2-dv6d-2A0A0G2JGQ7 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Trav15d-2-dv6d-2A0A0G2JGQ7 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav15d-2-dv6d-2A0A0G2JGQ7 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
Trav15d-2-dv6d-2A0A0G2JGQ7 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav15d-2-dv6d-2A0A0G2JGQ7 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav15d-2-dv6d-2A0A0G2JGQ7 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav15d-2-dv6d-2A0A0G2JGQ7 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trav15d-2-dv6d-2A0A0G2JGQ7 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trav15d-2-dv6d-2A0A0G2JGQ7 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trav15d-2-dv6d-2A0A0G2JGQ7 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Trav15d-2-dv6d-2A0A0G2JGQ7 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trav15d-2-dv6d-2A0A0G2JGQ7 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Trav15d-2-dv6d-2A0A0G2JGQ7 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav15d-2-dv6d-2A0A0G2JGQ7 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav15d-2-dv6d-2A0A0G2JGQ7 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms