Protein–RNA interactions for Protein: A0A0G2JG17

Trav23, T cell receptor alpha variable 23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav23A0A0G2JG17 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav23A0A0G2JG17 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trav23A0A0G2JG17 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav23A0A0G2JG17 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav23A0A0G2JG17 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav23A0A0G2JG17 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav23A0A0G2JG17 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Trav23A0A0G2JG17 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav23A0A0G2JG17 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Trav23A0A0G2JG17 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC17.43■□□□□ 0.38
Trav23A0A0G2JG17 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC17.43■□□□□ 0.38
Trav23A0A0G2JG17 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav23A0A0G2JG17 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav23A0A0G2JG17 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav23A0A0G2JG17 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav23A0A0G2JG17 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav23A0A0G2JG17 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Trav23A0A0G2JG17 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Trav23A0A0G2JG17 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav23A0A0G2JG17 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC17.42■□□□□ 0.38
Trav23A0A0G2JG17 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav23A0A0G2JG17 Gm6934-201ENSMUST00000194780 1905 ntBASIC17.42■□□□□ 0.38
Trav23A0A0G2JG17 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav23A0A0G2JG17 H3f3aos-201ENSMUST00000097448 2905 ntBASIC17.42■□□□□ 0.38
Trav23A0A0G2JG17 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Trav23A0A0G2JG17 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav23A0A0G2JG17 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Trav23A0A0G2JG17 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav23A0A0G2JG17 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC17.41■□□□□ 0.38
Trav23A0A0G2JG17 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav23A0A0G2JG17 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav23A0A0G2JG17 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav23A0A0G2JG17 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trav23A0A0G2JG17 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav23A0A0G2JG17 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav23A0A0G2JG17 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav23A0A0G2JG17 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav23A0A0G2JG17 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Trav23A0A0G2JG17 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav23A0A0G2JG17 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav23A0A0G2JG17 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.39■□□□□ 0.38
Trav23A0A0G2JG17 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav23A0A0G2JG17 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav23A0A0G2JG17 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav23A0A0G2JG17 Gm5921-201ENSMUST00000075898 882 ntBASIC17.39■□□□□ 0.37
Trav23A0A0G2JG17 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Trav23A0A0G2JG17 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav23A0A0G2JG17 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trav23A0A0G2JG17 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav23A0A0G2JG17 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.37
Trav23A0A0G2JG17 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trav23A0A0G2JG17 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC17.38■□□□□ 0.37
Trav23A0A0G2JG17 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav23A0A0G2JG17 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav23A0A0G2JG17 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav23A0A0G2JG17 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Trav23A0A0G2JG17 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav23A0A0G2JG17 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trav23A0A0G2JG17 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Trav23A0A0G2JG17 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav23A0A0G2JG17 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
Trav23A0A0G2JG17 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC17.37■□□□□ 0.37
Trav23A0A0G2JG17 Dmtn-209ENSMUST00000228295 2572 ntBASIC17.37■□□□□ 0.37
Trav23A0A0G2JG17 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav23A0A0G2JG17 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trav23A0A0G2JG17 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trav23A0A0G2JG17 Gm28731-201ENSMUST00000185564 1569 ntBASIC17.36■□□□□ 0.37
Trav23A0A0G2JG17 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav23A0A0G2JG17 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav23A0A0G2JG17 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav23A0A0G2JG17 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav23A0A0G2JG17 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
Trav23A0A0G2JG17 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav23A0A0G2JG17 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav23A0A0G2JG17 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC17.35■□□□□ 0.37
Trav23A0A0G2JG17 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav23A0A0G2JG17 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav23A0A0G2JG17 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav23A0A0G2JG17 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trav23A0A0G2JG17 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav23A0A0G2JG17 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trav23A0A0G2JG17 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trav23A0A0G2JG17 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC17.34■□□□□ 0.37
Trav23A0A0G2JG17 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav23A0A0G2JG17 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC17.34■□□□□ 0.37
Trav23A0A0G2JG17 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.34■□□□□ 0.37
Trav23A0A0G2JG17 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Trav23A0A0G2JG17 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Trav23A0A0G2JG17 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav23A0A0G2JG17 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Trav23A0A0G2JG17 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Trav23A0A0G2JG17 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Trav23A0A0G2JG17 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Trav23A0A0G2JG17 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav23A0A0G2JG17 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC17.33■□□□□ 0.36
Trav23A0A0G2JG17 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.33■□□□□ 0.36
Trav23A0A0G2JG17 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav23A0A0G2JG17 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav23A0A0G2JG17 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav23A0A0G2JG17 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms