Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.22■□□□□ 0.67
Trbv20A0A0B4J1H5 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
Trbv20A0A0B4J1H5 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trbv20A0A0B4J1H5 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trbv20A0A0B4J1H5 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.21■□□□□ 0.67
Trbv20A0A0B4J1H5 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trbv20A0A0B4J1H5 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trbv20A0A0B4J1H5 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trbv20A0A0B4J1H5 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Trbv20A0A0B4J1H5 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trbv20A0A0B4J1H5 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trbv20A0A0B4J1H5 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trbv20A0A0B4J1H5 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trbv20A0A0B4J1H5 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trbv20A0A0B4J1H5 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trbv20A0A0B4J1H5 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.2■□□□□ 0.66
Trbv20A0A0B4J1H5 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.2■□□□□ 0.66
Trbv20A0A0B4J1H5 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trbv20A0A0B4J1H5 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Trbv20A0A0B4J1H5 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Trbv20A0A0B4J1H5 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trbv20A0A0B4J1H5 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trbv20A0A0B4J1H5 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Trbv20A0A0B4J1H5 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trbv20A0A0B4J1H5 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trbv20A0A0B4J1H5 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trbv20A0A0B4J1H5 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trbv20A0A0B4J1H5 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.19■□□□□ 0.66
Trbv20A0A0B4J1H5 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trbv20A0A0B4J1H5 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trbv20A0A0B4J1H5 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trbv20A0A0B4J1H5 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.18■□□□□ 0.66
Trbv20A0A0B4J1H5 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trbv20A0A0B4J1H5 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trbv20A0A0B4J1H5 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trbv20A0A0B4J1H5 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trbv20A0A0B4J1H5 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trbv20A0A0B4J1H5 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Trbv20A0A0B4J1H5 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trbv20A0A0B4J1H5 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trbv20A0A0B4J1H5 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.18■□□□□ 0.66
Trbv20A0A0B4J1H5 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
Trbv20A0A0B4J1H5 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trbv20A0A0B4J1H5 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Trbv20A0A0B4J1H5 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trbv20A0A0B4J1H5 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trbv20A0A0B4J1H5 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trbv20A0A0B4J1H5 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Trbv20A0A0B4J1H5 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trbv20A0A0B4J1H5 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trbv20A0A0B4J1H5 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trbv20A0A0B4J1H5 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trbv20A0A0B4J1H5 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trbv20A0A0B4J1H5 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trbv20A0A0B4J1H5 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trbv20A0A0B4J1H5 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.15■□□□□ 0.66
Trbv20A0A0B4J1H5 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trbv20A0A0B4J1H5 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trbv20A0A0B4J1H5 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trbv20A0A0B4J1H5 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trbv20A0A0B4J1H5 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trbv20A0A0B4J1H5 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
Trbv20A0A0B4J1H5 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trbv20A0A0B4J1H5 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trbv20A0A0B4J1H5 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Trbv20A0A0B4J1H5 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC19.14■□□□□ 0.65
Trbv20A0A0B4J1H5 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.14■□□□□ 0.65
Trbv20A0A0B4J1H5 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trbv20A0A0B4J1H5 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trbv20A0A0B4J1H5 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trbv20A0A0B4J1H5 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trbv20A0A0B4J1H5 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
Trbv20A0A0B4J1H5 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trbv20A0A0B4J1H5 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trbv20A0A0B4J1H5 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trbv20A0A0B4J1H5 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trbv20A0A0B4J1H5 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Trbv20A0A0B4J1H5 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trbv20A0A0B4J1H5 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trbv20A0A0B4J1H5 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trbv20A0A0B4J1H5 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Trbv20A0A0B4J1H5 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Trbv20A0A0B4J1H5 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trbv20A0A0B4J1H5 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trbv20A0A0B4J1H5 Gm9812-201ENSMUST00000061934 968 ntBASIC19.12■□□□□ 0.65
Trbv20A0A0B4J1H5 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Trbv20A0A0B4J1H5 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trbv20A0A0B4J1H5 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trbv20A0A0B4J1H5 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.11■□□□□ 0.65
Trbv20A0A0B4J1H5 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trbv20A0A0B4J1H5 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Trbv20A0A0B4J1H5 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trbv20A0A0B4J1H5 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trbv20A0A0B4J1H5 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trbv20A0A0B4J1H5 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trbv20A0A0B4J1H5 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trbv20A0A0B4J1H5 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trbv20A0A0B4J1H5 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trbv20A0A0B4J1H5 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Trbv20A0A0B4J1H5 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms