Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Trbv3A0A0A6YYE2 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC16.55■□□□□ 0.24
Trbv3A0A0A6YYE2 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv3A0A0A6YYE2 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Trbv3A0A0A6YYE2 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.54■□□□□ 0.24
Trbv3A0A0A6YYE2 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv3A0A0A6YYE2 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv3A0A0A6YYE2 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv3A0A0A6YYE2 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Trbv3A0A0A6YYE2 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Trbv3A0A0A6YYE2 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC16.54■□□□□ 0.24
Trbv3A0A0A6YYE2 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv3A0A0A6YYE2 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv3A0A0A6YYE2 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC16.53■□□□□ 0.24
Trbv3A0A0A6YYE2 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv3A0A0A6YYE2 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
Trbv3A0A0A6YYE2 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv3A0A0A6YYE2 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv3A0A0A6YYE2 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Trbv3A0A0A6YYE2 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
Trbv3A0A0A6YYE2 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv3A0A0A6YYE2 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv3A0A0A6YYE2 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv3A0A0A6YYE2 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trbv3A0A0A6YYE2 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Trbv3A0A0A6YYE2 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Trbv3A0A0A6YYE2 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trbv3A0A0A6YYE2 Gm45855-201ENSMUST00000212546 880 ntBASIC16.52■□□□□ 0.24
Trbv3A0A0A6YYE2 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trbv3A0A0A6YYE2 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trbv3A0A0A6YYE2 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trbv3A0A0A6YYE2 Gm4430-201ENSMUST00000192413 1943 ntBASIC16.51■□□□□ 0.23
Trbv3A0A0A6YYE2 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv3A0A0A6YYE2 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv3A0A0A6YYE2 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv3A0A0A6YYE2 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC16.51■□□□□ 0.23
Trbv3A0A0A6YYE2 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv3A0A0A6YYE2 Nkain2-201ENSMUST00000092602 558 ntBASIC16.51■□□□□ 0.23
Trbv3A0A0A6YYE2 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv3A0A0A6YYE2 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv3A0A0A6YYE2 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC16.51■□□□□ 0.23
Trbv3A0A0A6YYE2 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv3A0A0A6YYE2 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv3A0A0A6YYE2 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv3A0A0A6YYE2 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv3A0A0A6YYE2 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv3A0A0A6YYE2 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv3A0A0A6YYE2 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv3A0A0A6YYE2 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv3A0A0A6YYE2 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv3A0A0A6YYE2 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv3A0A0A6YYE2 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv3A0A0A6YYE2 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv3A0A0A6YYE2 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC16.49■□□□□ 0.23
Trbv3A0A0A6YYE2 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Trbv3A0A0A6YYE2 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Trbv3A0A0A6YYE2 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv3A0A0A6YYE2 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv3A0A0A6YYE2 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv3A0A0A6YYE2 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Trbv3A0A0A6YYE2 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv3A0A0A6YYE2 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
Trbv3A0A0A6YYE2 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv3A0A0A6YYE2 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC16.48■□□□□ 0.23
Trbv3A0A0A6YYE2 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Trbv3A0A0A6YYE2 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv3A0A0A6YYE2 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Trbv3A0A0A6YYE2 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv3A0A0A6YYE2 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv3A0A0A6YYE2 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Trbv3A0A0A6YYE2 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv3A0A0A6YYE2 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv3A0A0A6YYE2 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Trbv3A0A0A6YYE2 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv3A0A0A6YYE2 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Trbv3A0A0A6YYE2 AC117245.4-201ENSMUST00000217388 1646 ntBASIC16.47■□□□□ 0.23
Trbv3A0A0A6YYE2 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv3A0A0A6YYE2 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv3A0A0A6YYE2 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv3A0A0A6YYE2 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv3A0A0A6YYE2 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv3A0A0A6YYE2 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv3A0A0A6YYE2 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Trbv3A0A0A6YYE2 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Trbv3A0A0A6YYE2 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv3A0A0A6YYE2 Gm34220-201ENSMUST00000223001 2709 ntBASIC16.46■□□□□ 0.23
Trbv3A0A0A6YYE2 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv3A0A0A6YYE2 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC16.46■□□□□ 0.23
Trbv3A0A0A6YYE2 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv3A0A0A6YYE2 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv3A0A0A6YYE2 Kdm3b-204ENSMUST00000224715 2032 ntBASIC16.46■□□□□ 0.23
Trbv3A0A0A6YYE2 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv3A0A0A6YYE2 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv3A0A0A6YYE2 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv3A0A0A6YYE2 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Trbv3A0A0A6YYE2 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC16.46■□□□□ 0.22
Trbv3A0A0A6YYE2 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv3A0A0A6YYE2 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv3A0A0A6YYE2 Gm43403-201ENSMUST00000198011 1786 ntBASIC16.45■□□□□ 0.22
Trbv3A0A0A6YYE2 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms