Protein–RNA interactions for Protein: A0A0A6YXN8

Sirpb1b, Signal-regulatory protein beta 1B, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1bA0A0A6YXN8 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Sirpb1bA0A0A6YXN8 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sirpb1bA0A0A6YXN8 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Sirpb1bA0A0A6YXN8 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Sirpb1bA0A0A6YXN8 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Sirpb1bA0A0A6YXN8 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sirpb1bA0A0A6YXN8 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.85■□□□□ 0.61
Sirpb1bA0A0A6YXN8 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sirpb1bA0A0A6YXN8 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.84■□□□□ 0.61
Sirpb1bA0A0A6YXN8 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.83■□□□□ 0.61
Sirpb1bA0A0A6YXN8 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sirpb1bA0A0A6YXN8 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sirpb1bA0A0A6YXN8 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
Sirpb1bA0A0A6YXN8 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sirpb1bA0A0A6YXN8 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sirpb1bA0A0A6YXN8 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Sirpb1bA0A0A6YXN8 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sirpb1bA0A0A6YXN8 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sirpb1bA0A0A6YXN8 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Sirpb1bA0A0A6YXN8 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sirpb1bA0A0A6YXN8 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sirpb1bA0A0A6YXN8 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.82■□□□□ 0.6
Sirpb1bA0A0A6YXN8 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sirpb1bA0A0A6YXN8 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sirpb1bA0A0A6YXN8 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sirpb1bA0A0A6YXN8 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sirpb1bA0A0A6YXN8 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.81■□□□□ 0.6
Sirpb1bA0A0A6YXN8 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sirpb1bA0A0A6YXN8 Gm22567-201ENSMUST00000175542 342 ntBASIC18.81■□□□□ 0.6
Sirpb1bA0A0A6YXN8 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sirpb1bA0A0A6YXN8 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sirpb1bA0A0A6YXN8 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sirpb1bA0A0A6YXN8 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sirpb1bA0A0A6YXN8 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sirpb1bA0A0A6YXN8 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sirpb1bA0A0A6YXN8 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sirpb1bA0A0A6YXN8 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.8■□□□□ 0.6
Sirpb1bA0A0A6YXN8 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sirpb1bA0A0A6YXN8 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sirpb1bA0A0A6YXN8 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sirpb1bA0A0A6YXN8 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sirpb1bA0A0A6YXN8 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sirpb1bA0A0A6YXN8 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.8■□□□□ 0.6
Sirpb1bA0A0A6YXN8 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sirpb1bA0A0A6YXN8 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sirpb1bA0A0A6YXN8 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sirpb1bA0A0A6YXN8 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC18.79■□□□□ 0.6
Sirpb1bA0A0A6YXN8 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Sirpb1bA0A0A6YXN8 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Sirpb1bA0A0A6YXN8 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sirpb1bA0A0A6YXN8 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.78■□□□□ 0.6
Sirpb1bA0A0A6YXN8 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sirpb1bA0A0A6YXN8 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sirpb1bA0A0A6YXN8 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sirpb1bA0A0A6YXN8 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sirpb1bA0A0A6YXN8 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sirpb1bA0A0A6YXN8 Gm15546-201ENSMUST00000122095 826 ntBASIC18.77■□□□□ 0.6
Sirpb1bA0A0A6YXN8 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.77■□□□□ 0.6
Sirpb1bA0A0A6YXN8 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sirpb1bA0A0A6YXN8 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Sirpb1bA0A0A6YXN8 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sirpb1bA0A0A6YXN8 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sirpb1bA0A0A6YXN8 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Sirpb1bA0A0A6YXN8 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sirpb1bA0A0A6YXN8 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sirpb1bA0A0A6YXN8 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Sirpb1bA0A0A6YXN8 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sirpb1bA0A0A6YXN8 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.76■□□□□ 0.59
Sirpb1bA0A0A6YXN8 Gm44428-201ENSMUST00000204474 874 ntBASIC18.75■□□□□ 0.59
Sirpb1bA0A0A6YXN8 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sirpb1bA0A0A6YXN8 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Sirpb1bA0A0A6YXN8 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Sirpb1bA0A0A6YXN8 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Sirpb1bA0A0A6YXN8 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.75■□□□□ 0.59
Sirpb1bA0A0A6YXN8 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18.74■□□□□ 0.59
Sirpb1bA0A0A6YXN8 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Sirpb1bA0A0A6YXN8 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Sirpb1bA0A0A6YXN8 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sirpb1bA0A0A6YXN8 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.74■□□□□ 0.59
Sirpb1bA0A0A6YXN8 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sirpb1bA0A0A6YXN8 Notumos-201ENSMUST00000151998 2659 ntBASIC18.74■□□□□ 0.59
Sirpb1bA0A0A6YXN8 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.74■□□□□ 0.59
Sirpb1bA0A0A6YXN8 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sirpb1bA0A0A6YXN8 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sirpb1bA0A0A6YXN8 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sirpb1bA0A0A6YXN8 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sirpb1bA0A0A6YXN8 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC18.73■□□□□ 0.59
Sirpb1bA0A0A6YXN8 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sirpb1bA0A0A6YXN8 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Sirpb1bA0A0A6YXN8 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sirpb1bA0A0A6YXN8 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.72■□□□□ 0.59
Sirpb1bA0A0A6YXN8 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Sirpb1bA0A0A6YXN8 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Sirpb1bA0A0A6YXN8 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Sirpb1bA0A0A6YXN8 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sirpb1bA0A0A6YXN8 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sirpb1bA0A0A6YXN8 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Sirpb1bA0A0A6YXN8 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Sirpb1bA0A0A6YXN8 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Sirpb1bA0A0A6YXN8 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms