Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav17A0A075B655 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav17A0A075B655 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav17A0A075B655 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Trav17A0A075B655 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Trav17A0A075B655 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.02■□□□□ 0.31
Trav17A0A075B655 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav17A0A075B655 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav17A0A075B655 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Trav17A0A075B655 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.01■□□□□ 0.31
Trav17A0A075B655 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav17A0A075B655 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav17A0A075B655 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav17A0A075B655 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav17A0A075B655 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Trav17A0A075B655 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Trav17A0A075B655 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Trav17A0A075B655 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trav17A0A075B655 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav17A0A075B655 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Trav17A0A075B655 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav17A0A075B655 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Trav17A0A075B655 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC17■□□□□ 0.31
Trav17A0A075B655 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav17A0A075B655 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17■□□□□ 0.31
Trav17A0A075B655 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav17A0A075B655 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav17A0A075B655 Gm8503-201ENSMUST00000118131 455 ntBASIC16.99■□□□□ 0.31
Trav17A0A075B655 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav17A0A075B655 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC16.98■□□□□ 0.31
Trav17A0A075B655 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav17A0A075B655 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Trav17A0A075B655 Gm45364-201ENSMUST00000210883 159 ntBASIC16.98■□□□□ 0.31
Trav17A0A075B655 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Trav17A0A075B655 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Trav17A0A075B655 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC16.98■□□□□ 0.31
Trav17A0A075B655 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav17A0A075B655 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav17A0A075B655 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Trav17A0A075B655 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
Trav17A0A075B655 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav17A0A075B655 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav17A0A075B655 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Trav17A0A075B655 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC16.97■□□□□ 0.31
Trav17A0A075B655 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trav17A0A075B655 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trav17A0A075B655 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav17A0A075B655 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trav17A0A075B655 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
Trav17A0A075B655 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trav17A0A075B655 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav17A0A075B655 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Trav17A0A075B655 AC117245.4-201ENSMUST00000217388 1646 ntBASIC16.96■□□□□ 0.31
Trav17A0A075B655 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav17A0A075B655 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav17A0A075B655 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Trav17A0A075B655 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav17A0A075B655 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trav17A0A075B655 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trav17A0A075B655 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trav17A0A075B655 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav17A0A075B655 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav17A0A075B655 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Trav17A0A075B655 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav17A0A075B655 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav17A0A075B655 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav17A0A075B655 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav17A0A075B655 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav17A0A075B655 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Trav17A0A075B655 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC16.94■□□□□ 0.3
Trav17A0A075B655 Gm42418-201ENSMUST00000182010 1831 ntBASIC16.94■□□□□ 0.3
Trav17A0A075B655 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav17A0A075B655 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav17A0A075B655 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav17A0A075B655 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav17A0A075B655 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Trav17A0A075B655 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav17A0A075B655 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trav17A0A075B655 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav17A0A075B655 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav17A0A075B655 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav17A0A075B655 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav17A0A075B655 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav17A0A075B655 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav17A0A075B655 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
Trav17A0A075B655 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav17A0A075B655 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav17A0A075B655 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC16.92■□□□□ 0.3
Trav17A0A075B655 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav17A0A075B655 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Trav17A0A075B655 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trav17A0A075B655 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trav17A0A075B655 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Trav17A0A075B655 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav17A0A075B655 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC16.92■□□□□ 0.3
Trav17A0A075B655 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Trav17A0A075B655 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trav17A0A075B655 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Trav17A0A075B655 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav17A0A075B655 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms