Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trav8n-2A0A075B633 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trav8n-2A0A075B633 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trav8n-2A0A075B633 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trav8n-2A0A075B633 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trav8n-2A0A075B633 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.82■□□□□ 0.76
Trav8n-2A0A075B633 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.82■□□□□ 0.76
Trav8n-2A0A075B633 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trav8n-2A0A075B633 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trav8n-2A0A075B633 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.82■□□□□ 0.76
Trav8n-2A0A075B633 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.82■□□□□ 0.76
Trav8n-2A0A075B633 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trav8n-2A0A075B633 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trav8n-2A0A075B633 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Trav8n-2A0A075B633 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trav8n-2A0A075B633 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.8■□□□□ 0.76
Trav8n-2A0A075B633 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trav8n-2A0A075B633 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trav8n-2A0A075B633 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trav8n-2A0A075B633 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trav8n-2A0A075B633 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trav8n-2A0A075B633 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Trav8n-2A0A075B633 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trav8n-2A0A075B633 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trav8n-2A0A075B633 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trav8n-2A0A075B633 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trav8n-2A0A075B633 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
Trav8n-2A0A075B633 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.78■□□□□ 0.76
Trav8n-2A0A075B633 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trav8n-2A0A075B633 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.78■□□□□ 0.76
Trav8n-2A0A075B633 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trav8n-2A0A075B633 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.78■□□□□ 0.76
Trav8n-2A0A075B633 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trav8n-2A0A075B633 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trav8n-2A0A075B633 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trav8n-2A0A075B633 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.77■□□□□ 0.76
Trav8n-2A0A075B633 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trav8n-2A0A075B633 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trav8n-2A0A075B633 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trav8n-2A0A075B633 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.76■□□□□ 0.75
Trav8n-2A0A075B633 Serp2-204ENSMUST00000228055 705 ntBASIC19.76■□□□□ 0.75
Trav8n-2A0A075B633 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav8n-2A0A075B633 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav8n-2A0A075B633 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav8n-2A0A075B633 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trav8n-2A0A075B633 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trav8n-2A0A075B633 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.75■□□□□ 0.75
Trav8n-2A0A075B633 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.75■□□□□ 0.75
Trav8n-2A0A075B633 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trav8n-2A0A075B633 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trav8n-2A0A075B633 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trav8n-2A0A075B633 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trav8n-2A0A075B633 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Trav8n-2A0A075B633 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.74■□□□□ 0.75
Trav8n-2A0A075B633 Golgb1-201ENSMUST00000023534 498 ntBASIC19.74■□□□□ 0.75
Trav8n-2A0A075B633 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trav8n-2A0A075B633 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.74■□□□□ 0.75
Trav8n-2A0A075B633 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav8n-2A0A075B633 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav8n-2A0A075B633 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav8n-2A0A075B633 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav8n-2A0A075B633 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav8n-2A0A075B633 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Trav8n-2A0A075B633 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav8n-2A0A075B633 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.73■□□□□ 0.75
Trav8n-2A0A075B633 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.73■□□□□ 0.75
Trav8n-2A0A075B633 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav8n-2A0A075B633 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Trav8n-2A0A075B633 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.73■□□□□ 0.75
Trav8n-2A0A075B633 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav8n-2A0A075B633 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Trav8n-2A0A075B633 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav8n-2A0A075B633 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.72■□□□□ 0.75
Trav8n-2A0A075B633 Gm27454-201ENSMUST00000185090 204 ntBASIC19.72■□□□□ 0.75
Trav8n-2A0A075B633 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trav8n-2A0A075B633 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trav8n-2A0A075B633 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trav8n-2A0A075B633 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.71■□□□□ 0.75
Trav8n-2A0A075B633 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.71■□□□□ 0.75
Trav8n-2A0A075B633 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
Trav8n-2A0A075B633 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trav8n-2A0A075B633 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trav8n-2A0A075B633 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trav8n-2A0A075B633 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav8n-2A0A075B633 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Trav8n-2A0A075B633 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Trav8n-2A0A075B633 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trav8n-2A0A075B633 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Trav8n-2A0A075B633 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
Trav8n-2A0A075B633 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.7■□□□□ 0.74
Trav8n-2A0A075B633 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trav8n-2A0A075B633 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trav8n-2A0A075B633 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trav8n-2A0A075B633 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Trav8n-2A0A075B633 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.69■□□□□ 0.74
Trav8n-2A0A075B633 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.69■□□□□ 0.74
Trav8n-2A0A075B633 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trav8n-2A0A075B633 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.68■□□□□ 0.74
Trav8n-2A0A075B633 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trav8n-2A0A075B633 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 99.7 ms