Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.78■□□□□ 0.92
Cldn9Q9Z0S7 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.78■□□□□ 0.92
Cldn9Q9Z0S7 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cldn9Q9Z0S7 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cldn9Q9Z0S7 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cldn9Q9Z0S7 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.78■□□□□ 0.92
Cldn9Q9Z0S7 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cldn9Q9Z0S7 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cldn9Q9Z0S7 Gm14523-201ENSMUST00000117260 558 ntBASIC20.77■□□□□ 0.92
Cldn9Q9Z0S7 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.77■□□□□ 0.92
Cldn9Q9Z0S7 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cldn9Q9Z0S7 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Cldn9Q9Z0S7 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.77■□□□□ 0.91
Cldn9Q9Z0S7 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cldn9Q9Z0S7 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cldn9Q9Z0S7 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Cldn9Q9Z0S7 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cldn9Q9Z0S7 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.76■□□□□ 0.91
Cldn9Q9Z0S7 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Cldn9Q9Z0S7 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cldn9Q9Z0S7 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cldn9Q9Z0S7 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Cldn9Q9Z0S7 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cldn9Q9Z0S7 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cldn9Q9Z0S7 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cldn9Q9Z0S7 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cldn9Q9Z0S7 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cldn9Q9Z0S7 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cldn9Q9Z0S7 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cldn9Q9Z0S7 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cldn9Q9Z0S7 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cldn9Q9Z0S7 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cldn9Q9Z0S7 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cldn9Q9Z0S7 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cldn9Q9Z0S7 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.74■□□□□ 0.91
Cldn9Q9Z0S7 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.74■□□□□ 0.91
Cldn9Q9Z0S7 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cldn9Q9Z0S7 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.74■□□□□ 0.91
Cldn9Q9Z0S7 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cldn9Q9Z0S7 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cldn9Q9Z0S7 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cldn9Q9Z0S7 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cldn9Q9Z0S7 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cldn9Q9Z0S7 Mir6538-201ENSMUST00000183713 110 ntBASIC20.73■□□□□ 0.91
Cldn9Q9Z0S7 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.73■□□□□ 0.91
Cldn9Q9Z0S7 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cldn9Q9Z0S7 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.73■□□□□ 0.91
Cldn9Q9Z0S7 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cldn9Q9Z0S7 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cldn9Q9Z0S7 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Cldn9Q9Z0S7 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cldn9Q9Z0S7 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cldn9Q9Z0S7 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cldn9Q9Z0S7 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.71■□□□□ 0.91
Cldn9Q9Z0S7 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cldn9Q9Z0S7 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cldn9Q9Z0S7 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Cldn9Q9Z0S7 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cldn9Q9Z0S7 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cldn9Q9Z0S7 Gm7332-201ENSMUST00000118351 454 ntBASIC20.71■□□□□ 0.91
Cldn9Q9Z0S7 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.71■□□□□ 0.91
Cldn9Q9Z0S7 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cldn9Q9Z0S7 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Cldn9Q9Z0S7 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.91
Cldn9Q9Z0S7 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Cldn9Q9Z0S7 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Cldn9Q9Z0S7 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Cldn9Q9Z0S7 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cldn9Q9Z0S7 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cldn9Q9Z0S7 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cldn9Q9Z0S7 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cldn9Q9Z0S7 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cldn9Q9Z0S7 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cldn9Q9Z0S7 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cldn9Q9Z0S7 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cldn9Q9Z0S7 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.69■□□□□ 0.9
Cldn9Q9Z0S7 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cldn9Q9Z0S7 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cldn9Q9Z0S7 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.69■□□□□ 0.9
Cldn9Q9Z0S7 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cldn9Q9Z0S7 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Cldn9Q9Z0S7 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cldn9Q9Z0S7 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cldn9Q9Z0S7 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cldn9Q9Z0S7 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Cldn9Q9Z0S7 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cldn9Q9Z0S7 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cldn9Q9Z0S7 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Cldn9Q9Z0S7 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cldn9Q9Z0S7 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cldn9Q9Z0S7 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cldn9Q9Z0S7 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cldn9Q9Z0S7 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cldn9Q9Z0S7 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cldn9Q9Z0S7 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cldn9Q9Z0S7 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cldn9Q9Z0S7 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cldn9Q9Z0S7 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cldn9Q9Z0S7 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.67■□□□□ 0.9
Cldn9Q9Z0S7 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms