Protein–RNA interactions for Protein: Q9Z0S4

Cldn13, Claudin-13, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn13Q9Z0S4 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cldn13Q9Z0S4 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cldn13Q9Z0S4 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cldn13Q9Z0S4 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cldn13Q9Z0S4 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.23■□□□□ 0.67
Cldn13Q9Z0S4 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cldn13Q9Z0S4 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cldn13Q9Z0S4 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cldn13Q9Z0S4 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cldn13Q9Z0S4 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cldn13Q9Z0S4 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cldn13Q9Z0S4 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.21■□□□□ 0.67
Cldn13Q9Z0S4 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cldn13Q9Z0S4 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cldn13Q9Z0S4 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cldn13Q9Z0S4 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cldn13Q9Z0S4 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cldn13Q9Z0S4 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cldn13Q9Z0S4 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cldn13Q9Z0S4 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Cldn13Q9Z0S4 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cldn13Q9Z0S4 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cldn13Q9Z0S4 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Cldn13Q9Z0S4 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.2■□□□□ 0.66
Cldn13Q9Z0S4 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Cldn13Q9Z0S4 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cldn13Q9Z0S4 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.19■□□□□ 0.66
Cldn13Q9Z0S4 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cldn13Q9Z0S4 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cldn13Q9Z0S4 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Cldn13Q9Z0S4 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cldn13Q9Z0S4 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.18■□□□□ 0.66
Cldn13Q9Z0S4 Gm22567-201ENSMUST00000175542 342 ntBASIC19.18■□□□□ 0.66
Cldn13Q9Z0S4 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cldn13Q9Z0S4 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cldn13Q9Z0S4 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Cldn13Q9Z0S4 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cldn13Q9Z0S4 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cldn13Q9Z0S4 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cldn13Q9Z0S4 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cldn13Q9Z0S4 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cldn13Q9Z0S4 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Cldn13Q9Z0S4 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cldn13Q9Z0S4 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cldn13Q9Z0S4 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Cldn13Q9Z0S4 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cldn13Q9Z0S4 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cldn13Q9Z0S4 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cldn13Q9Z0S4 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cldn13Q9Z0S4 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cldn13Q9Z0S4 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Cldn13Q9Z0S4 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cldn13Q9Z0S4 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cldn13Q9Z0S4 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cldn13Q9Z0S4 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cldn13Q9Z0S4 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cldn13Q9Z0S4 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Cldn13Q9Z0S4 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Cldn13Q9Z0S4 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.16■□□□□ 0.66
Cldn13Q9Z0S4 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Cldn13Q9Z0S4 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cldn13Q9Z0S4 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Cldn13Q9Z0S4 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cldn13Q9Z0S4 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.15■□□□□ 0.66
Cldn13Q9Z0S4 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cldn13Q9Z0S4 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Cldn13Q9Z0S4 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cldn13Q9Z0S4 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cldn13Q9Z0S4 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
Cldn13Q9Z0S4 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Cldn13Q9Z0S4 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cldn13Q9Z0S4 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.14■□□□□ 0.65
Cldn13Q9Z0S4 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cldn13Q9Z0S4 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cldn13Q9Z0S4 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Cldn13Q9Z0S4 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.13■□□□□ 0.65
Cldn13Q9Z0S4 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cldn13Q9Z0S4 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cldn13Q9Z0S4 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cldn13Q9Z0S4 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cldn13Q9Z0S4 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.13■□□□□ 0.65
Cldn13Q9Z0S4 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Cldn13Q9Z0S4 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.13■□□□□ 0.65
Cldn13Q9Z0S4 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cldn13Q9Z0S4 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cldn13Q9Z0S4 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Cldn13Q9Z0S4 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cldn13Q9Z0S4 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cldn13Q9Z0S4 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cldn13Q9Z0S4 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cldn13Q9Z0S4 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Cldn13Q9Z0S4 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cldn13Q9Z0S4 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Cldn13Q9Z0S4 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cldn13Q9Z0S4 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.1■□□□□ 0.65
Cldn13Q9Z0S4 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cldn13Q9Z0S4 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.1■□□□□ 0.65
Cldn13Q9Z0S4 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cldn13Q9Z0S4 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cldn13Q9Z0S4 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms