Protein–RNA interactions for Protein: Q9WVS6

Prkn, E3 ubiquitin-protein ligase parkin, mousemouse

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrknQ9WVS6 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PrknQ9WVS6 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.75■□□□□ 0.75
PrknQ9WVS6 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PrknQ9WVS6 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PrknQ9WVS6 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
PrknQ9WVS6 Gm14523-201ENSMUST00000117260 558 ntBASIC19.75■□□□□ 0.75
PrknQ9WVS6 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.75■□□□□ 0.75
PrknQ9WVS6 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.75■□□□□ 0.75
PrknQ9WVS6 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.75■□□□□ 0.75
PrknQ9WVS6 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
PrknQ9WVS6 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PrknQ9WVS6 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PrknQ9WVS6 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PrknQ9WVS6 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PrknQ9WVS6 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PrknQ9WVS6 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PrknQ9WVS6 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PrknQ9WVS6 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.74■□□□□ 0.75
PrknQ9WVS6 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PrknQ9WVS6 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PrknQ9WVS6 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PrknQ9WVS6 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PrknQ9WVS6 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PrknQ9WVS6 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PrknQ9WVS6 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
PrknQ9WVS6 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PrknQ9WVS6 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
PrknQ9WVS6 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PrknQ9WVS6 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PrknQ9WVS6 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PrknQ9WVS6 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PrknQ9WVS6 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PrknQ9WVS6 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PrknQ9WVS6 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.71■□□□□ 0.75
PrknQ9WVS6 Gm7332-201ENSMUST00000118351 454 ntBASIC19.71■□□□□ 0.75
PrknQ9WVS6 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.71■□□□□ 0.75
PrknQ9WVS6 Gm12366-201ENSMUST00000121722 873 ntBASIC19.71■□□□□ 0.75
PrknQ9WVS6 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.71■□□□□ 0.75
PrknQ9WVS6 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.71■□□□□ 0.75
PrknQ9WVS6 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PrknQ9WVS6 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.71■□□□□ 0.75
PrknQ9WVS6 Gm5786-201ENSMUST00000085368 882 ntBASIC19.71■□□□□ 0.75
PrknQ9WVS6 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
PrknQ9WVS6 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PrknQ9WVS6 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.71■□□□□ 0.75
PrknQ9WVS6 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PrknQ9WVS6 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PrknQ9WVS6 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PrknQ9WVS6 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PrknQ9WVS6 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PrknQ9WVS6 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PrknQ9WVS6 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
PrknQ9WVS6 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PrknQ9WVS6 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
PrknQ9WVS6 Gm22567-201ENSMUST00000175542 342 ntBASIC19.69■□□□□ 0.74
PrknQ9WVS6 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PrknQ9WVS6 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
PrknQ9WVS6 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.68■□□□□ 0.74
PrknQ9WVS6 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.68■□□□□ 0.74
PrknQ9WVS6 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
PrknQ9WVS6 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
PrknQ9WVS6 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.68■□□□□ 0.74
PrknQ9WVS6 Mir6538-201ENSMUST00000183713 110 ntBASIC19.68■□□□□ 0.74
PrknQ9WVS6 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.68■□□□□ 0.74
PrknQ9WVS6 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PrknQ9WVS6 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PrknQ9WVS6 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PrknQ9WVS6 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PrknQ9WVS6 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PrknQ9WVS6 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PrknQ9WVS6 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PrknQ9WVS6 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PrknQ9WVS6 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PrknQ9WVS6 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PrknQ9WVS6 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PrknQ9WVS6 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PrknQ9WVS6 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
PrknQ9WVS6 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PrknQ9WVS6 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
PrknQ9WVS6 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PrknQ9WVS6 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PrknQ9WVS6 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
PrknQ9WVS6 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PrknQ9WVS6 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PrknQ9WVS6 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PrknQ9WVS6 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PrknQ9WVS6 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PrknQ9WVS6 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PrknQ9WVS6 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.65■□□□□ 0.74
PrknQ9WVS6 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PrknQ9WVS6 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.65■□□□□ 0.74
PrknQ9WVS6 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PrknQ9WVS6 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PrknQ9WVS6 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PrknQ9WVS6 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PrknQ9WVS6 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PrknQ9WVS6 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PrknQ9WVS6 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PrknQ9WVS6 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PrknQ9WVS6 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms