Protein–RNA interactions for Protein: Q9D5J6

Shpk, Sedoheptulokinase, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShpkQ9D5J6 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
ShpkQ9D5J6 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ShpkQ9D5J6 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ShpkQ9D5J6 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ShpkQ9D5J6 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ShpkQ9D5J6 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ShpkQ9D5J6 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.07■□□□□ 0.48
ShpkQ9D5J6 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.07■□□□□ 0.48
ShpkQ9D5J6 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ShpkQ9D5J6 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ShpkQ9D5J6 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ShpkQ9D5J6 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ShpkQ9D5J6 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ShpkQ9D5J6 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
ShpkQ9D5J6 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
ShpkQ9D5J6 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ShpkQ9D5J6 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ShpkQ9D5J6 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ShpkQ9D5J6 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ShpkQ9D5J6 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ShpkQ9D5J6 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ShpkQ9D5J6 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ShpkQ9D5J6 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.05■□□□□ 0.48
ShpkQ9D5J6 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ShpkQ9D5J6 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
ShpkQ9D5J6 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ShpkQ9D5J6 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
ShpkQ9D5J6 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
ShpkQ9D5J6 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ShpkQ9D5J6 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ShpkQ9D5J6 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ShpkQ9D5J6 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
ShpkQ9D5J6 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ShpkQ9D5J6 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ShpkQ9D5J6 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ShpkQ9D5J6 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ShpkQ9D5J6 Gm22567-201ENSMUST00000175542 342 ntBASIC18.03■□□□□ 0.48
ShpkQ9D5J6 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.02■□□□□ 0.48
ShpkQ9D5J6 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ShpkQ9D5J6 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ShpkQ9D5J6 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
ShpkQ9D5J6 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ShpkQ9D5J6 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
ShpkQ9D5J6 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ShpkQ9D5J6 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ShpkQ9D5J6 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
ShpkQ9D5J6 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
ShpkQ9D5J6 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.01■□□□□ 0.47
ShpkQ9D5J6 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ShpkQ9D5J6 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ShpkQ9D5J6 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18■□□□□ 0.47
ShpkQ9D5J6 Gm8109-201ENSMUST00000194076 746 ntBASIC18■□□□□ 0.47
ShpkQ9D5J6 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC18■□□□□ 0.47
ShpkQ9D5J6 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC18■□□□□ 0.47
ShpkQ9D5J6 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
ShpkQ9D5J6 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
ShpkQ9D5J6 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
ShpkQ9D5J6 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ShpkQ9D5J6 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ShpkQ9D5J6 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
ShpkQ9D5J6 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
ShpkQ9D5J6 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
ShpkQ9D5J6 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
ShpkQ9D5J6 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
ShpkQ9D5J6 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ShpkQ9D5J6 Iqck-206ENSMUST00000208658 2891 ntBASIC17.99■□□□□ 0.47
ShpkQ9D5J6 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC17.99■□□□□ 0.47
ShpkQ9D5J6 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC17.98■□□□□ 0.47
ShpkQ9D5J6 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
ShpkQ9D5J6 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ShpkQ9D5J6 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC17.98■□□□□ 0.47
ShpkQ9D5J6 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
ShpkQ9D5J6 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ShpkQ9D5J6 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ShpkQ9D5J6 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
ShpkQ9D5J6 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ShpkQ9D5J6 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ShpkQ9D5J6 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
ShpkQ9D5J6 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ShpkQ9D5J6 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ShpkQ9D5J6 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC17.96■□□□□ 0.47
ShpkQ9D5J6 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ShpkQ9D5J6 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ShpkQ9D5J6 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ShpkQ9D5J6 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ShpkQ9D5J6 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.95■□□□□ 0.46
ShpkQ9D5J6 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
ShpkQ9D5J6 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ShpkQ9D5J6 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
ShpkQ9D5J6 Gm24804-201ENSMUST00000174982 85 ntBASIC17.95■□□□□ 0.46
ShpkQ9D5J6 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
ShpkQ9D5J6 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ShpkQ9D5J6 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ShpkQ9D5J6 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ShpkQ9D5J6 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
ShpkQ9D5J6 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ShpkQ9D5J6 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ShpkQ9D5J6 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ShpkQ9D5J6 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ShpkQ9D5J6 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms