Protein–RNA interactions for Protein: Q9D1H0

Rita1, RBPJ-interacting and tubulin-associated protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rita1Q9D1H0 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Rita1Q9D1H0 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Rita1Q9D1H0 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rita1Q9D1H0 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.05■□□□□ 0.8
Rita1Q9D1H0 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rita1Q9D1H0 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rita1Q9D1H0 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Rita1Q9D1H0 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Rita1Q9D1H0 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rita1Q9D1H0 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Rita1Q9D1H0 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.04■□□□□ 0.8
Rita1Q9D1H0 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Rita1Q9D1H0 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rita1Q9D1H0 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rita1Q9D1H0 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rita1Q9D1H0 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rita1Q9D1H0 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rita1Q9D1H0 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.02■□□□□ 0.8
Rita1Q9D1H0 Gm22567-201ENSMUST00000175542 342 ntBASIC20.02■□□□□ 0.8
Rita1Q9D1H0 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rita1Q9D1H0 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.02■□□□□ 0.8
Rita1Q9D1H0 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rita1Q9D1H0 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rita1Q9D1H0 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rita1Q9D1H0 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.01■□□□□ 0.79
Rita1Q9D1H0 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rita1Q9D1H0 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rita1Q9D1H0 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Rita1Q9D1H0 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20■□□□□ 0.79
Rita1Q9D1H0 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
Rita1Q9D1H0 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Rita1Q9D1H0 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rita1Q9D1H0 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20■□□□□ 0.79
Rita1Q9D1H0 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rita1Q9D1H0 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Rita1Q9D1H0 Gm5522-201ENSMUST00000189483 1242 ntBASIC20■□□□□ 0.79
Rita1Q9D1H0 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20■□□□□ 0.79
Rita1Q9D1H0 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rita1Q9D1H0 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rita1Q9D1H0 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rita1Q9D1H0 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rita1Q9D1H0 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rita1Q9D1H0 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rita1Q9D1H0 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rita1Q9D1H0 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Rita1Q9D1H0 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rita1Q9D1H0 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rita1Q9D1H0 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rita1Q9D1H0 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rita1Q9D1H0 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rita1Q9D1H0 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rita1Q9D1H0 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.97■□□□□ 0.79
Rita1Q9D1H0 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rita1Q9D1H0 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rita1Q9D1H0 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rita1Q9D1H0 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rita1Q9D1H0 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rita1Q9D1H0 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rita1Q9D1H0 Gm15546-201ENSMUST00000122095 826 ntBASIC19.96■□□□□ 0.79
Rita1Q9D1H0 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rita1Q9D1H0 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rita1Q9D1H0 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rita1Q9D1H0 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rita1Q9D1H0 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rita1Q9D1H0 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rita1Q9D1H0 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rita1Q9D1H0 Gm15820-201ENSMUST00000201566 728 ntBASIC19.95■□□□□ 0.78
Rita1Q9D1H0 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rita1Q9D1H0 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Rita1Q9D1H0 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rita1Q9D1H0 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.95■□□□□ 0.78
Rita1Q9D1H0 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rita1Q9D1H0 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rita1Q9D1H0 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.94■□□□□ 0.78
Rita1Q9D1H0 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.94■□□□□ 0.78
Rita1Q9D1H0 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rita1Q9D1H0 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rita1Q9D1H0 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Rita1Q9D1H0 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Rita1Q9D1H0 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rita1Q9D1H0 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rita1Q9D1H0 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rita1Q9D1H0 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Rita1Q9D1H0 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rita1Q9D1H0 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rita1Q9D1H0 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Rita1Q9D1H0 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.93■□□□□ 0.78
Rita1Q9D1H0 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rita1Q9D1H0 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rita1Q9D1H0 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rita1Q9D1H0 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rita1Q9D1H0 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
Rita1Q9D1H0 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Rita1Q9D1H0 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.92■□□□□ 0.78
Rita1Q9D1H0 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rita1Q9D1H0 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rita1Q9D1H0 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rita1Q9D1H0 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rita1Q9D1H0 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Rita1Q9D1H0 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms