Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Lsm7Q9CQQ8 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC21.86■■□□□ 1.09
Lsm7Q9CQQ8 Rps24-207ENSMUST00000224568 714 ntBASIC21.86■■□□□ 1.09
Lsm7Q9CQQ8 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Lsm7Q9CQQ8 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.86■■□□□ 1.09
Lsm7Q9CQQ8 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Lsm7Q9CQQ8 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Lsm7Q9CQQ8 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Lsm7Q9CQQ8 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Lsm7Q9CQQ8 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.85■■□□□ 1.09
Lsm7Q9CQQ8 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Lsm7Q9CQQ8 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Lsm7Q9CQQ8 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Lsm7Q9CQQ8 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
Lsm7Q9CQQ8 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Lsm7Q9CQQ8 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.85■■□□□ 1.09
Lsm7Q9CQQ8 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Lsm7Q9CQQ8 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Lsm7Q9CQQ8 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Lsm7Q9CQQ8 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Lsm7Q9CQQ8 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Lsm7Q9CQQ8 Gm22567-201ENSMUST00000175542 342 ntBASIC21.84■■□□□ 1.09
Lsm7Q9CQQ8 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Lsm7Q9CQQ8 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.83■■□□□ 1.09
Lsm7Q9CQQ8 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Lsm7Q9CQQ8 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.83■■□□□ 1.09
Lsm7Q9CQQ8 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.83■■□□□ 1.08
Lsm7Q9CQQ8 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Lsm7Q9CQQ8 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Lsm7Q9CQQ8 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Lsm7Q9CQQ8 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Lsm7Q9CQQ8 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Lsm7Q9CQQ8 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Lsm7Q9CQQ8 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.82■■□□□ 1.08
Lsm7Q9CQQ8 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.82■■□□□ 1.08
Lsm7Q9CQQ8 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Lsm7Q9CQQ8 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Lsm7Q9CQQ8 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Lsm7Q9CQQ8 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Lsm7Q9CQQ8 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.81■■□□□ 1.08
Lsm7Q9CQQ8 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Lsm7Q9CQQ8 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Lsm7Q9CQQ8 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Lsm7Q9CQQ8 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Lsm7Q9CQQ8 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Lsm7Q9CQQ8 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Lsm7Q9CQQ8 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Lsm7Q9CQQ8 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Lsm7Q9CQQ8 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Lsm7Q9CQQ8 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Lsm7Q9CQQ8 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Lsm7Q9CQQ8 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Lsm7Q9CQQ8 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Lsm7Q9CQQ8 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Lsm7Q9CQQ8 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Lsm7Q9CQQ8 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Lsm7Q9CQQ8 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Lsm7Q9CQQ8 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.79■■□□□ 1.08
Lsm7Q9CQQ8 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Lsm7Q9CQQ8 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Lsm7Q9CQQ8 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Lsm7Q9CQQ8 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Lsm7Q9CQQ8 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Lsm7Q9CQQ8 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.78■■□□□ 1.08
Lsm7Q9CQQ8 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.78■■□□□ 1.08
Lsm7Q9CQQ8 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Lsm7Q9CQQ8 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
Lsm7Q9CQQ8 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Lsm7Q9CQQ8 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Lsm7Q9CQQ8 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.77■■□□□ 1.08
Lsm7Q9CQQ8 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Lsm7Q9CQQ8 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Lsm7Q9CQQ8 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Lsm7Q9CQQ8 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Lsm7Q9CQQ8 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.76■■□□□ 1.07
Lsm7Q9CQQ8 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Lsm7Q9CQQ8 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Lsm7Q9CQQ8 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.76■■□□□ 1.07
Lsm7Q9CQQ8 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Lsm7Q9CQQ8 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Lsm7Q9CQQ8 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.75■■□□□ 1.07
Lsm7Q9CQQ8 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.75■■□□□ 1.07
Lsm7Q9CQQ8 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Lsm7Q9CQQ8 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.74■■□□□ 1.07
Lsm7Q9CQQ8 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Lsm7Q9CQQ8 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.74■■□□□ 1.07
Lsm7Q9CQQ8 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Lsm7Q9CQQ8 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Lsm7Q9CQQ8 Gm45102-201ENSMUST00000207427 857 ntBASIC21.74■■□□□ 1.07
Lsm7Q9CQQ8 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.74■■□□□ 1.07
Lsm7Q9CQQ8 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Lsm7Q9CQQ8 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
Lsm7Q9CQQ8 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Lsm7Q9CQQ8 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Lsm7Q9CQQ8 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Lsm7Q9CQQ8 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Lsm7Q9CQQ8 Gm9959-201ENSMUST00000068277 390 ntBASIC21.73■■□□□ 1.07
Lsm7Q9CQQ8 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Lsm7Q9CQQ8 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Lsm7Q9CQQ8 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms