Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.28■■□□□ 1
Trim33Q99PP7 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.28■■□□□ 1
Trim33Q99PP7 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.28■■□□□ 1
Trim33Q99PP7 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Trim33Q99PP7 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.28■■□□□ 1
Trim33Q99PP7 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Trim33Q99PP7 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.27■■□□□ 1
Trim33Q99PP7 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.27■■□□□ 1
Trim33Q99PP7 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
Trim33Q99PP7 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Trim33Q99PP7 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.27■■□□□ 1
Trim33Q99PP7 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Trim33Q99PP7 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Trim33Q99PP7 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Trim33Q99PP7 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim33Q99PP7 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.26■□□□□ 0.99
Trim33Q99PP7 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim33Q99PP7 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Trim33Q99PP7 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.26■□□□□ 0.99
Trim33Q99PP7 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim33Q99PP7 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim33Q99PP7 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Trim33Q99PP7 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Trim33Q99PP7 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.25■□□□□ 0.99
Trim33Q99PP7 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Trim33Q99PP7 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
Trim33Q99PP7 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.25■□□□□ 0.99
Trim33Q99PP7 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim33Q99PP7 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim33Q99PP7 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Trim33Q99PP7 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim33Q99PP7 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim33Q99PP7 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Trim33Q99PP7 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim33Q99PP7 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim33Q99PP7 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.23■□□□□ 0.99
Trim33Q99PP7 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Trim33Q99PP7 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim33Q99PP7 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim33Q99PP7 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Trim33Q99PP7 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.23■□□□□ 0.99
Trim33Q99PP7 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Trim33Q99PP7 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim33Q99PP7 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim33Q99PP7 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.22■□□□□ 0.99
Trim33Q99PP7 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim33Q99PP7 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim33Q99PP7 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim33Q99PP7 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim33Q99PP7 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim33Q99PP7 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Trim33Q99PP7 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.21■□□□□ 0.99
Trim33Q99PP7 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Trim33Q99PP7 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim33Q99PP7 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim33Q99PP7 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.21■□□□□ 0.99
Trim33Q99PP7 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim33Q99PP7 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Trim33Q99PP7 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim33Q99PP7 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim33Q99PP7 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim33Q99PP7 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Trim33Q99PP7 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim33Q99PP7 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Trim33Q99PP7 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
Trim33Q99PP7 Gm22567-201ENSMUST00000175542 342 ntBASIC21.19■□□□□ 0.98
Trim33Q99PP7 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21.19■□□□□ 0.98
Trim33Q99PP7 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Trim33Q99PP7 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim33Q99PP7 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim33Q99PP7 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim33Q99PP7 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.18■□□□□ 0.98
Trim33Q99PP7 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.18■□□□□ 0.98
Trim33Q99PP7 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim33Q99PP7 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Trim33Q99PP7 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Trim33Q99PP7 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim33Q99PP7 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Trim33Q99PP7 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Trim33Q99PP7 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Trim33Q99PP7 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim33Q99PP7 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim33Q99PP7 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim33Q99PP7 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.16■□□□□ 0.98
Trim33Q99PP7 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.16■□□□□ 0.98
Trim33Q99PP7 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim33Q99PP7 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Trim33Q99PP7 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.15■□□□□ 0.98
Trim33Q99PP7 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim33Q99PP7 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim33Q99PP7 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim33Q99PP7 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Trim33Q99PP7 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Trim33Q99PP7 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Trim33Q99PP7 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim33Q99PP7 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.14■□□□□ 0.97
Trim33Q99PP7 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim33Q99PP7 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim33Q99PP7 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim33Q99PP7 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms