Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.69■■□□□ 1.22
Cdh23Q99PF4 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Cdh23Q99PF4 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Cdh23Q99PF4 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
Cdh23Q99PF4 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Cdh23Q99PF4 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC22.68■■□□□ 1.22
Cdh23Q99PF4 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Cdh23Q99PF4 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Cdh23Q99PF4 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Cdh23Q99PF4 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Cdh23Q99PF4 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Cdh23Q99PF4 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC22.67■■□□□ 1.22
Cdh23Q99PF4 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC22.67■■□□□ 1.22
Cdh23Q99PF4 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Cdh23Q99PF4 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Cdh23Q99PF4 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Cdh23Q99PF4 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Cdh23Q99PF4 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
Cdh23Q99PF4 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC22.65■■□□□ 1.22
Cdh23Q99PF4 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Cdh23Q99PF4 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
Cdh23Q99PF4 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Cdh23Q99PF4 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Cdh23Q99PF4 Gm28536-201ENSMUST00000190971 1317 ntBASIC22.64■■□□□ 1.21
Cdh23Q99PF4 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
Cdh23Q99PF4 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Cdh23Q99PF4 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
Cdh23Q99PF4 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Cdh23Q99PF4 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC22.63■■□□□ 1.21
Cdh23Q99PF4 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Cdh23Q99PF4 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC22.63■■□□□ 1.21
Cdh23Q99PF4 Gm7199-201ENSMUST00000118327 1485 ntBASIC22.63■■□□□ 1.21
Cdh23Q99PF4 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Cdh23Q99PF4 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Cdh23Q99PF4 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC22.61■■□□□ 1.21
Cdh23Q99PF4 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Cdh23Q99PF4 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Cdh23Q99PF4 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Cdh23Q99PF4 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC22.6■■□□□ 1.21
Cdh23Q99PF4 Gm6139-201ENSMUST00000079261 882 ntBASIC22.6■■□□□ 1.21
Cdh23Q99PF4 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Cdh23Q99PF4 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
Cdh23Q99PF4 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Cdh23Q99PF4 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
Cdh23Q99PF4 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Cdh23Q99PF4 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Cdh23Q99PF4 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
Cdh23Q99PF4 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Cdh23Q99PF4 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Cdh23Q99PF4 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Cdh23Q99PF4 AC122428.3-201ENSMUST00000215551 2290 ntBASIC22.59■■□□□ 1.21
Cdh23Q99PF4 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Cdh23Q99PF4 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Cdh23Q99PF4 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Cdh23Q99PF4 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Cdh23Q99PF4 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
Cdh23Q99PF4 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC22.58■■□□□ 1.21
Cdh23Q99PF4 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.2
Cdh23Q99PF4 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Cdh23Q99PF4 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Cdh23Q99PF4 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Cdh23Q99PF4 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC22.57■■□□□ 1.2
Cdh23Q99PF4 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Cdh23Q99PF4 Gm21168-201ENSMUST00000199646 1096 ntBASIC22.56■■□□□ 1.2
Cdh23Q99PF4 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Cdh23Q99PF4 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Cdh23Q99PF4 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Cdh23Q99PF4 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC22.56■■□□□ 1.2
Cdh23Q99PF4 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Cdh23Q99PF4 AC153524.1-201ENSMUST00000220436 1935 ntBASIC22.56■■□□□ 1.2
Cdh23Q99PF4 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC22.56■■□□□ 1.2
Cdh23Q99PF4 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC22.55■■□□□ 1.2
Cdh23Q99PF4 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
Cdh23Q99PF4 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC22.55■■□□□ 1.2
Cdh23Q99PF4 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Cdh23Q99PF4 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Cdh23Q99PF4 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Cdh23Q99PF4 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Cdh23Q99PF4 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Cdh23Q99PF4 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC22.55■■□□□ 1.2
Cdh23Q99PF4 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Cdh23Q99PF4 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC22.54■■□□□ 1.2
Cdh23Q99PF4 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Cdh23Q99PF4 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC22.54■■□□□ 1.2
Cdh23Q99PF4 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Cdh23Q99PF4 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Cdh23Q99PF4 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Cdh23Q99PF4 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Cdh23Q99PF4 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Cdh23Q99PF4 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC22.53■■□□□ 1.2
Cdh23Q99PF4 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Cdh23Q99PF4 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Cdh23Q99PF4 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Cdh23Q99PF4 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
Cdh23Q99PF4 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
Cdh23Q99PF4 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Cdh23Q99PF4 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Cdh23Q99PF4 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Cdh23Q99PF4 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC22.52■■□□□ 1.2
Cdh23Q99PF4 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 141.7 ms