Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cdk9Q99J95 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cdk9Q99J95 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Cdk9Q99J95 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Cdk9Q99J95 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Cdk9Q99J95 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Cdk9Q99J95 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.61■■□□□ 1.05
Cdk9Q99J95 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cdk9Q99J95 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cdk9Q99J95 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cdk9Q99J95 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cdk9Q99J95 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cdk9Q99J95 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Cdk9Q99J95 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.6■■□□□ 1.05
Cdk9Q99J95 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cdk9Q99J95 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.6■■□□□ 1.05
Cdk9Q99J95 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cdk9Q99J95 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cdk9Q99J95 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Cdk9Q99J95 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cdk9Q99J95 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cdk9Q99J95 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Cdk9Q99J95 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cdk9Q99J95 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cdk9Q99J95 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Cdk9Q99J95 Gm7432-201ENSMUST00000210343 879 ntBASIC21.58■■□□□ 1.05
Cdk9Q99J95 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
Cdk9Q99J95 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Cdk9Q99J95 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cdk9Q99J95 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.57■■□□□ 1.04
Cdk9Q99J95 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cdk9Q99J95 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cdk9Q99J95 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cdk9Q99J95 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.57■■□□□ 1.04
Cdk9Q99J95 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cdk9Q99J95 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cdk9Q99J95 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cdk9Q99J95 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Cdk9Q99J95 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cdk9Q99J95 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Cdk9Q99J95 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cdk9Q99J95 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.56■■□□□ 1.04
Cdk9Q99J95 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.56■■□□□ 1.04
Cdk9Q99J95 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cdk9Q99J95 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cdk9Q99J95 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cdk9Q99J95 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Cdk9Q99J95 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cdk9Q99J95 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cdk9Q99J95 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cdk9Q99J95 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Cdk9Q99J95 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Cdk9Q99J95 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cdk9Q99J95 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cdk9Q99J95 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cdk9Q99J95 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.54■■□□□ 1.04
Cdk9Q99J95 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Cdk9Q99J95 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cdk9Q99J95 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Cdk9Q99J95 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cdk9Q99J95 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cdk9Q99J95 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cdk9Q99J95 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cdk9Q99J95 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Cdk9Q99J95 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cdk9Q99J95 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cdk9Q99J95 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cdk9Q99J95 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cdk9Q99J95 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cdk9Q99J95 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cdk9Q99J95 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cdk9Q99J95 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cdk9Q99J95 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cdk9Q99J95 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cdk9Q99J95 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cdk9Q99J95 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Cdk9Q99J95 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cdk9Q99J95 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Cdk9Q99J95 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Cdk9Q99J95 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
Cdk9Q99J95 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.5■■□□□ 1.03
Cdk9Q99J95 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cdk9Q99J95 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cdk9Q99J95 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.5■■□□□ 1.03
Cdk9Q99J95 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.5■■□□□ 1.03
Cdk9Q99J95 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.5■■□□□ 1.03
Cdk9Q99J95 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cdk9Q99J95 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Cdk9Q99J95 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cdk9Q99J95 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.49■■□□□ 1.03
Cdk9Q99J95 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cdk9Q99J95 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.49■■□□□ 1.03
Cdk9Q99J95 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
Cdk9Q99J95 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cdk9Q99J95 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Cdk9Q99J95 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cdk9Q99J95 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Cdk9Q99J95 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cdk9Q99J95 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.48■■□□□ 1.03
Cdk9Q99J95 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 729.1 ms