Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhga11Q91XY8 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhga11Q91XY8 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhga11Q91XY8 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.75■□□□□ 0.91
Pcdhga11Q91XY8 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhga11Q91XY8 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.74■□□□□ 0.91
Pcdhga11Q91XY8 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhga11Q91XY8 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhga11Q91XY8 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.73■□□□□ 0.91
Pcdhga11Q91XY8 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhga11Q91XY8 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhga11Q91XY8 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhga11Q91XY8 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhga11Q91XY8 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhga11Q91XY8 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Pcdhga11Q91XY8 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhga11Q91XY8 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Pcdhga11Q91XY8 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.72■□□□□ 0.91
Pcdhga11Q91XY8 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhga11Q91XY8 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhga11Q91XY8 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhga11Q91XY8 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.71■□□□□ 0.91
Pcdhga11Q91XY8 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhga11Q91XY8 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhga11Q91XY8 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.71■□□□□ 0.91
Pcdhga11Q91XY8 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhga11Q91XY8 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhga11Q91XY8 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhga11Q91XY8 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhga11Q91XY8 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhga11Q91XY8 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhga11Q91XY8 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Pcdhga11Q91XY8 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Pcdhga11Q91XY8 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhga11Q91XY8 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhga11Q91XY8 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Pcdhga11Q91XY8 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhga11Q91XY8 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.68■□□□□ 0.9
Pcdhga11Q91XY8 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.68■□□□□ 0.9
Pcdhga11Q91XY8 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhga11Q91XY8 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhga11Q91XY8 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhga11Q91XY8 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhga11Q91XY8 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhga11Q91XY8 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.67■□□□□ 0.9
Pcdhga11Q91XY8 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhga11Q91XY8 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhga11Q91XY8 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhga11Q91XY8 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhga11Q91XY8 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhga11Q91XY8 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhga11Q91XY8 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Pcdhga11Q91XY8 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhga11Q91XY8 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhga11Q91XY8 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Pcdhga11Q91XY8 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhga11Q91XY8 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhga11Q91XY8 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Pcdhga11Q91XY8 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhga11Q91XY8 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhga11Q91XY8 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhga11Q91XY8 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhga11Q91XY8 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhga11Q91XY8 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.65■□□□□ 0.9
Pcdhga11Q91XY8 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhga11Q91XY8 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhga11Q91XY8 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pcdhga11Q91XY8 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhga11Q91XY8 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.64■□□□□ 0.89
Pcdhga11Q91XY8 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.64■□□□□ 0.89
Pcdhga11Q91XY8 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhga11Q91XY8 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhga11Q91XY8 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
Pcdhga11Q91XY8 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhga11Q91XY8 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhga11Q91XY8 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Pcdhga11Q91XY8 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhga11Q91XY8 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhga11Q91XY8 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.62■□□□□ 0.89
Pcdhga11Q91XY8 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhga11Q91XY8 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhga11Q91XY8 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.62■□□□□ 0.89
Pcdhga11Q91XY8 Gm12366-201ENSMUST00000121722 873 ntBASIC20.62■□□□□ 0.89
Pcdhga11Q91XY8 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.62■□□□□ 0.89
Pcdhga11Q91XY8 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.62■□□□□ 0.89
Pcdhga11Q91XY8 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhga11Q91XY8 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhga11Q91XY8 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.62■□□□□ 0.89
Pcdhga11Q91XY8 Gm5786-201ENSMUST00000085368 882 ntBASIC20.62■□□□□ 0.89
Pcdhga11Q91XY8 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhga11Q91XY8 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.62■□□□□ 0.89
Pcdhga11Q91XY8 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhga11Q91XY8 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhga11Q91XY8 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Pcdhga11Q91XY8 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhga11Q91XY8 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhga11Q91XY8 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhga11Q91XY8 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhga11Q91XY8 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhga11Q91XY8 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 9.3 ms