Protein–RNA interactions for Protein: Q91XX8

Pcdhgb1, Protocadherin gamma B1, mousemouse

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb1Q91XX8 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Pcdhgb1Q91XX8 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC22.46■■□□□ 1.19
Pcdhgb1Q91XX8 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Pcdhgb1Q91XX8 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
Pcdhgb1Q91XX8 Gm6934-201ENSMUST00000194780 1905 ntBASIC22.46■■□□□ 1.19
Pcdhgb1Q91XX8 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Pcdhgb1Q91XX8 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Pcdhgb1Q91XX8 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC22.45■■□□□ 1.18
Pcdhgb1Q91XX8 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdhgb1Q91XX8 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdhgb1Q91XX8 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC22.45■■□□□ 1.18
Pcdhgb1Q91XX8 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdhgb1Q91XX8 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Pcdhgb1Q91XX8 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Pcdhgb1Q91XX8 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Pcdhgb1Q91XX8 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhgb1Q91XX8 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhgb1Q91XX8 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhgb1Q91XX8 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhgb1Q91XX8 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhgb1Q91XX8 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhgb1Q91XX8 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhgb1Q91XX8 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
Pcdhgb1Q91XX8 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhgb1Q91XX8 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhgb1Q91XX8 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhgb1Q91XX8 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
Pcdhgb1Q91XX8 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhgb1Q91XX8 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC22.42■■□□□ 1.18
Pcdhgb1Q91XX8 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC22.42■■□□□ 1.18
Pcdhgb1Q91XX8 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhgb1Q91XX8 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Pcdhgb1Q91XX8 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Pcdhgb1Q91XX8 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhgb1Q91XX8 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhgb1Q91XX8 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhgb1Q91XX8 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhgb1Q91XX8 Gm42501-201ENSMUST00000200220 1026 ntBASIC22.41■■□□□ 1.18
Pcdhgb1Q91XX8 Gm18755-201ENSMUST00000218030 1099 ntBASIC22.41■■□□□ 1.18
Pcdhgb1Q91XX8 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhgb1Q91XX8 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC22.41■■□□□ 1.18
Pcdhgb1Q91XX8 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhgb1Q91XX8 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhgb1Q91XX8 Gm28731-201ENSMUST00000185564 1569 ntBASIC22.41■■□□□ 1.18
Pcdhgb1Q91XX8 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhgb1Q91XX8 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
Pcdhgb1Q91XX8 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhgb1Q91XX8 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhgb1Q91XX8 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
Pcdhgb1Q91XX8 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhgb1Q91XX8 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC22.4■■□□□ 1.18
Pcdhgb1Q91XX8 Rps24-207ENSMUST00000224568 714 ntBASIC22.4■■□□□ 1.18
Pcdhgb1Q91XX8 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Pcdhgb1Q91XX8 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhgb1Q91XX8 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC22.4■■□□□ 1.18
Pcdhgb1Q91XX8 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
Pcdhgb1Q91XX8 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Pcdhgb1Q91XX8 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
Pcdhgb1Q91XX8 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Pcdhgb1Q91XX8 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhgb1Q91XX8 Gm14117-201ENSMUST00000122417 843 ntBASIC22.38■■□□□ 1.17
Pcdhgb1Q91XX8 Gm10232-201ENSMUST00000089221 720 ntBASIC22.38■■□□□ 1.17
Pcdhgb1Q91XX8 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC22.38■■□□□ 1.17
Pcdhgb1Q91XX8 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC22.38■■□□□ 1.17
Pcdhgb1Q91XX8 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhgb1Q91XX8 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC22.37■■□□□ 1.17
Pcdhgb1Q91XX8 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
Pcdhgb1Q91XX8 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhgb1Q91XX8 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhgb1Q91XX8 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
Pcdhgb1Q91XX8 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhgb1Q91XX8 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhgb1Q91XX8 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhgb1Q91XX8 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
Pcdhgb1Q91XX8 Gm9959-201ENSMUST00000068277 390 ntBASIC22.36■■□□□ 1.17
Pcdhgb1Q91XX8 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
Pcdhgb1Q91XX8 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhgb1Q91XX8 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC22.36■■□□□ 1.17
Pcdhgb1Q91XX8 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Pcdhgb1Q91XX8 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC22.36■■□□□ 1.17
Pcdhgb1Q91XX8 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Pcdhgb1Q91XX8 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC22.35■■□□□ 1.17
Pcdhgb1Q91XX8 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Pcdhgb1Q91XX8 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
Pcdhgb1Q91XX8 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Pcdhgb1Q91XX8 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Pcdhgb1Q91XX8 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdhgb1Q91XX8 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
Pcdhgb1Q91XX8 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdhgb1Q91XX8 Gm45102-201ENSMUST00000207427 857 ntBASIC22.34■■□□□ 1.17
Pcdhgb1Q91XX8 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdhgb1Q91XX8 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdhgb1Q91XX8 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdhgb1Q91XX8 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdhgb1Q91XX8 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdhgb1Q91XX8 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdhgb1Q91XX8 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdhgb1Q91XX8 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
Pcdhgb1Q91XX8 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhgb1Q91XX8 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC22.32■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms