Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
Pcdhgc3Q91XX1 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdhgc3Q91XX1 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdhgc3Q91XX1 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Pcdhgc3Q91XX1 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdhgc3Q91XX1 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdhgc3Q91XX1 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdhgc3Q91XX1 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhgc3Q91XX1 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhgc3Q91XX1 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhgc3Q91XX1 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhgc3Q91XX1 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhgc3Q91XX1 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Pcdhgc3Q91XX1 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Pcdhgc3Q91XX1 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhgc3Q91XX1 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhgc3Q91XX1 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhgc3Q91XX1 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhgc3Q91XX1 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhgc3Q91XX1 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhgc3Q91XX1 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhgc3Q91XX1 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhgc3Q91XX1 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhgc3Q91XX1 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Pcdhgc3Q91XX1 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.29■□□□□ 0.84
Pcdhgc3Q91XX1 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.29■□□□□ 0.84
Pcdhgc3Q91XX1 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Pcdhgc3Q91XX1 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.28■□□□□ 0.84
Pcdhgc3Q91XX1 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhgc3Q91XX1 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhgc3Q91XX1 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhgc3Q91XX1 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhgc3Q91XX1 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.28■□□□□ 0.84
Pcdhgc3Q91XX1 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhgc3Q91XX1 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
Pcdhgc3Q91XX1 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhgc3Q91XX1 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhgc3Q91XX1 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhgc3Q91XX1 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhgc3Q91XX1 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhgc3Q91XX1 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhgc3Q91XX1 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.27■□□□□ 0.84
Pcdhgc3Q91XX1 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhgc3Q91XX1 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhgc3Q91XX1 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhgc3Q91XX1 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhgc3Q91XX1 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Pcdhgc3Q91XX1 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.26■□□□□ 0.83
Pcdhgc3Q91XX1 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhgc3Q91XX1 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhgc3Q91XX1 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.26■□□□□ 0.83
Pcdhgc3Q91XX1 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhgc3Q91XX1 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhgc3Q91XX1 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhgc3Q91XX1 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhgc3Q91XX1 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhgc3Q91XX1 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhgc3Q91XX1 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhgc3Q91XX1 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhgc3Q91XX1 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhgc3Q91XX1 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.25■□□□□ 0.83
Pcdhgc3Q91XX1 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhgc3Q91XX1 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.25■□□□□ 0.83
Pcdhgc3Q91XX1 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhgc3Q91XX1 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhgc3Q91XX1 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhgc3Q91XX1 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.25■□□□□ 0.83
Pcdhgc3Q91XX1 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhgc3Q91XX1 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhgc3Q91XX1 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.24■□□□□ 0.83
Pcdhgc3Q91XX1 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Pcdhgc3Q91XX1 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
Pcdhgc3Q91XX1 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhgc3Q91XX1 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhgc3Q91XX1 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhgc3Q91XX1 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhgc3Q91XX1 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhgc3Q91XX1 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhgc3Q91XX1 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Pcdhgc3Q91XX1 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhgc3Q91XX1 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhgc3Q91XX1 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhgc3Q91XX1 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Pcdhgc3Q91XX1 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhgc3Q91XX1 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.21■□□□□ 0.83
Pcdhgc3Q91XX1 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhgc3Q91XX1 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Pcdhgc3Q91XX1 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhgc3Q91XX1 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.21■□□□□ 0.83
Pcdhgc3Q91XX1 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
Pcdhgc3Q91XX1 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Pcdhgc3Q91XX1 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhgc3Q91XX1 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhgc3Q91XX1 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhgc3Q91XX1 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhgc3Q91XX1 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Pcdhgc3Q91XX1 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhgc3Q91XX1 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
Pcdhgc3Q91XX1 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhgc3Q91XX1 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms