Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rab40cQ8VHQ4 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC17.6■□□□□ 0.41
Rab40cQ8VHQ4 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rab40cQ8VHQ4 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rab40cQ8VHQ4 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.6■□□□□ 0.41
Rab40cQ8VHQ4 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.6■□□□□ 0.41
Rab40cQ8VHQ4 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC17.6■□□□□ 0.41
Rab40cQ8VHQ4 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rab40cQ8VHQ4 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
Rab40cQ8VHQ4 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rab40cQ8VHQ4 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
Rab40cQ8VHQ4 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rab40cQ8VHQ4 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.59■□□□□ 0.41
Rab40cQ8VHQ4 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rab40cQ8VHQ4 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Rab40cQ8VHQ4 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC17.59■□□□□ 0.41
Rab40cQ8VHQ4 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rab40cQ8VHQ4 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rab40cQ8VHQ4 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC17.59■□□□□ 0.41
Rab40cQ8VHQ4 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Rab40cQ8VHQ4 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rab40cQ8VHQ4 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Rab40cQ8VHQ4 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rab40cQ8VHQ4 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rab40cQ8VHQ4 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Rab40cQ8VHQ4 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rab40cQ8VHQ4 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rab40cQ8VHQ4 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rab40cQ8VHQ4 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Rab40cQ8VHQ4 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rab40cQ8VHQ4 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rab40cQ8VHQ4 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rab40cQ8VHQ4 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rab40cQ8VHQ4 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rab40cQ8VHQ4 Gm7199-201ENSMUST00000118327 1485 ntBASIC17.56■□□□□ 0.4
Rab40cQ8VHQ4 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Rab40cQ8VHQ4 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17.56■□□□□ 0.4
Rab40cQ8VHQ4 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rab40cQ8VHQ4 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rab40cQ8VHQ4 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rab40cQ8VHQ4 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rab40cQ8VHQ4 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rab40cQ8VHQ4 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rab40cQ8VHQ4 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rab40cQ8VHQ4 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Rab40cQ8VHQ4 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rab40cQ8VHQ4 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rab40cQ8VHQ4 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rab40cQ8VHQ4 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC17.55■□□□□ 0.4
Rab40cQ8VHQ4 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rab40cQ8VHQ4 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rab40cQ8VHQ4 Gm13889-201ENSMUST00000099689 1386 ntBASIC17.54■□□□□ 0.4
Rab40cQ8VHQ4 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rab40cQ8VHQ4 Gm6821-201ENSMUST00000107540 542 ntBASIC17.54■□□□□ 0.4
Rab40cQ8VHQ4 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rab40cQ8VHQ4 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rab40cQ8VHQ4 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rab40cQ8VHQ4 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rab40cQ8VHQ4 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rab40cQ8VHQ4 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rab40cQ8VHQ4 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rab40cQ8VHQ4 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Rab40cQ8VHQ4 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Rab40cQ8VHQ4 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Rab40cQ8VHQ4 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rab40cQ8VHQ4 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC17.53■□□□□ 0.4
Rab40cQ8VHQ4 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rab40cQ8VHQ4 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rab40cQ8VHQ4 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rab40cQ8VHQ4 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Rab40cQ8VHQ4 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rab40cQ8VHQ4 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rab40cQ8VHQ4 AC153911.1-201ENSMUST00000220378 758 ntBASIC17.52■□□□□ 0.4
Rab40cQ8VHQ4 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rab40cQ8VHQ4 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rab40cQ8VHQ4 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rab40cQ8VHQ4 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rab40cQ8VHQ4 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rab40cQ8VHQ4 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rab40cQ8VHQ4 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
Rab40cQ8VHQ4 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rab40cQ8VHQ4 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rab40cQ8VHQ4 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rab40cQ8VHQ4 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rab40cQ8VHQ4 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC17.5■□□□□ 0.39
Rab40cQ8VHQ4 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Rab40cQ8VHQ4 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rab40cQ8VHQ4 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.5■□□□□ 0.39
Rab40cQ8VHQ4 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rab40cQ8VHQ4 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Rab40cQ8VHQ4 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rab40cQ8VHQ4 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rab40cQ8VHQ4 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rab40cQ8VHQ4 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Rab40cQ8VHQ4 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Rab40cQ8VHQ4 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rab40cQ8VHQ4 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
Rab40cQ8VHQ4 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
Rab40cQ8VHQ4 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC17.48■□□□□ 0.39
Rab40cQ8VHQ4 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms